Amycolatopsis acidiphila: LWP59_07735
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Entry
LWP59_07735 CDS
T07896
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
aacd
Amycolatopsis acidiphila
Brite
KEGG Orthology (KO) [BR:
aacd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aacd03032
]
LWP59_07735
03036 Chromosome and associated proteins [BR:
aacd03036
]
LWP59_07735
03400 DNA repair and recombination proteins [BR:
aacd03400
]
LWP59_07735
DNA replication proteins [BR:
aacd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LWP59_07735
Chromosome and associated proteins [BR:
aacd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LWP59_07735
DNA repair and recombination proteins [BR:
aacd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LWP59_07735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
UIJ61506
LinkDB
All DBs
Position
1582107..1582724
Genome browser
AA seq
205 aa
AA seq
DB search
MANKAQLIEALSERLGDKKVASEAVDGLVDIIIRTVNKGEKVNITGFGVFEKRARAARTA
RNPRTGETVRVKKTNVPAFRAGTTFKDVISGAKKLPKATAVKRATSTSSRSTGTTASRST
TTRATGTRATTGRSTATRPTATRSTTTRTRAAAATKTAAAPKTAAKSTTAKKTTAAKAAP
KAAARTTASKTTAAKKTTTSRAKKK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaggcccagctgatcgaggcgctctccgagcgtttgggcgacaagaaggtt
gcgtcggaggccgtcgacggtctcgtcgacatcatcatccgtacggtcaacaagggcgag
aaggtgaacatcaccggcttcggtgtgttcgagaagcgtgcccgtgccgcccgtaccgcg
cgcaacccgcggaccggtgagaccgtgcgcgtcaagaagaccaacgtgcccgccttccgc
gcgggaaccacgttcaaggacgtcatcagcggtgcgaagaagctgccgaaggccaccgcg
gtcaagcgcgcgacctccacgagcagccgcagcaccggcaccaccgcttcgcggtccacc
accacgcgtgccaccggcacccgtgcgacgaccggccgcagcaccgcgacccggcccacc
gccacgcgcagcaccaccacgcgcacgcgcgccgccgcggccaccaagacggctgctgcc
ccgaagaccgcggccaagtccaccacggccaagaagacgaccgctgccaaggcggcgccg
aaggccgcggccaggaccaccgcgagcaagaccaccgcggcgaagaagaccaccacttcg
cgcgccaagaagaagtag
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