Amycolatopsis acidiphila: LWP59_09250
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Entry
LWP59_09250 CDS
T07896
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
aacd
Amycolatopsis acidiphila
Pathway
aacd03030
DNA replication
aacd03430
Mismatch repair
aacd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aacd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LWP59_09250 (holA)
03430 Mismatch repair
LWP59_09250 (holA)
03440 Homologous recombination
LWP59_09250 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aacd03032
]
LWP59_09250 (holA)
03400 DNA repair and recombination proteins [BR:
aacd03400
]
LWP59_09250 (holA)
Enzymes [BR:
aacd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LWP59_09250 (holA)
DNA replication proteins [BR:
aacd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LWP59_09250 (holA)
DNA repair and recombination proteins [BR:
aacd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LWP59_09250 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
DUF6907
bDLD2
Motif
Other DBs
NCBI-ProteinID:
UIJ61784
LinkDB
All DBs
Position
1899947..1900927
Genome browser
AA seq
326 aa
AA seq
DB search
MTAPATTTSSLHLVLGEEELLVERAVRAALDSARLVDPAADMTRVRVSELTAPALAELVS
PSLFSEGRVIVLDAAQDISQELADAVLSYLKSPADGVVLVVVHTGGGRSKAAKALPAALR
KAGAQIADCPKITKPAERESFVRNEIRQAGGRIDASAVAALIDAVGSNLRELASAAAQLV
ADSGGKVDEEAVRRYHRGRADVTGFAVAENAVAGDRSAALESMRWAEQIGVPHVLVADAL
ADAVRTIARVSAAGRGNPNQMAGELGMPPWKIRKAQGQARGWGAAGLNKAMAIVARVNAE
VKGAAADPSYALERAILDLADARDLR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgccagccaccaccacgtcgtcgctgcacctcgtcctcggcgaggaagaactg
cttgtcgagcgggccgttcgcgctgcgctggactcggcacgactggtagacccggccgcc
gacatgacccgggttcgcgtgtccgaactcaccgctcccgcgctcgccgagctcgtcagc
ccgtcgctgttcagcgaagggcgggtcatcgtgctcgacgccgcgcaggacatctcgcag
gagctggccgacgcggtgctgtcctacctcaagtcgcccgcggacggggtcgtgctcgtc
gtcgtgcacaccggcggcggccgaagcaaggcggcgaaggcattgcccgccgcgttgcgc
aaggccggtgcacagatagccgactgcccgaagatcaccaagcccgccgagcgggaatcg
ttcgtacgcaacgaaatccggcaagcgggagggcgcatcgacgcgagcgcggtcgctgcc
ctcatcgacgcggtcggctcgaacctccgggaactcgcgtctgccgcggcccagctcgtc
gccgactccggtggcaaggtcgacgaggaagcagtacggcggtaccaccgagggcgcgcc
gacgtgacgggcttcgcggtggcggagaacgccgtcgccggtgaccgttccgcggcgctc
gagtcgatgcgctgggctgagcagatcggcgtcccgcacgtcctggtggccgacgccctc
gccgacgcggtccggaccatcgcgcgggtgtccgccgcggggcgtggcaacccgaaccag
atggccggtgagctggggatgccgccgtggaagatccgcaaggcgcaggggcaggcccga
ggctggggcgcggcaggcctgaacaaggcgatggcgatcgtggctcgggtgaacgccgag
gtcaaaggtgccgcggccgatccgtcctacgcgctcgaacgagcgatcctcgaccttgcg
gacgcccgcgacttgcgctga
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