Amycolatopsis acidiphila: LWP59_10225
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Entry
LWP59_10225 CDS
T07896
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
aacd
Amycolatopsis acidiphila
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Gene cluster
GFIT
Motif
Pfam:
DUF6596
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
TPR_14
Sigma70_ECF
Phage_coatGP8
MarR_2
Motif
Other DBs
NCBI-ProteinID:
UIJ61965
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Position
2077027..2078238
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AA seq
403 aa
AA seq
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MSAPARVEDLLRECAPQVLGALARRYGRFGACEDAVQEALLAAAVQWPDEGVPANPRGWL
VTVASRRLVDLTRSEEARRRREETVAAMPVPDEPPPAEDDTLTLLFLCCHPELSAASQVA
LTLRAVGGLTTAEIARAFLVPEATMAQRISRAKQRIKASGARFRMPPEPEQADRLRVVLH
VLYLIFNEGYTASSGPDLQRNDLTAEAIRLTRAVHALLPGEGEVAGLLALMLLTDARRPA
RTGADGALIPLAEQDRARWHTESIVEGVALVSESLARSELGPYQLQAAIAAVHAEAPSMA
ATDWPQILVLYRILERISPNPTVTLNSAVAVAMVEGPRAGLAVLDTLTGSLPEHHRLDAT
RAHLLEMAGETGAARRHYERAARATASIPERRYLEGRLRALGN
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgcctgctcgcgtcgaggacctgctgcgcgagtgcgcgccgcaggtcctcggc
gcgctggcccgccggtacggccggttcggcgcgtgcgaggacgcggtgcaggaggcgctg
ctcgccgcggcggtgcagtggccggacgagggcgtgccggcgaacccgcgcggctggctg
gtcaccgtcgcctcccgccgtctcgtcgacctcacacgcagcgaagaggcgcggcggcgg
cgcgaggagacggtcgcggcgatgcccgtgcccgacgagccgccgccggccgaggacgac
acgctgacgctgctgttcctgtgctgtcatccggagttgtcggcggcgtcgcaggtcgcg
ctcacgctgcgggccgtcggcggcctgacgaccgcggagatcgcgcgggcgttcctggtg
ccggaagcgacgatggcccaacggatcagccgcgcgaagcagcggatcaaggcctccggc
gcgcggttccggatgccgccggagccggagcaggccgaccggctgcgggtggtgctgcac
gtgctgtacctgatcttcaacgaggggtacaccgcgagctcgggcccggacctgcaacgc
aacgacctgacggcggaggcgatccggctgaccagggcggtgcacgcgttgctgccgggc
gagggggaggtcgcgggcctgctggcgctgatgctgctgaccgacgcgcggcgcccggcg
cggaccggggcggacggggcgctgatcccgctggccgaacaggaccgcgcccgctggcac
accgagtccattgtggagggtgtcgcgctggtctcggagtcgctggccaggtcggagctg
gggccgtaccagctgcaggcggcgatcgcggcggtgcacgcggaggcgccgtccatggcg
gcgaccgactggccgcagatcctggtgctgtaccggatcctggagcggatctcgccgaac
ccgacggtgacactgaacagcgcggtggccgtcgcgatggtcgaggggccgcgggcgggg
ctggcggtgctggacacgctgacgggaagcctgccggagcaccaccgcctggacgcgacg
cgcgcccacctgctggagatggcgggggagaccggagcggcgcgcaggcactacgaacgc
gccgcccgcgcgacggcgagcatccccgagcggcggtacctggagggaaggctgcgggcg
ctgggaaactga
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