Amycolatopsis acidiphila: LWP59_10965
Help
Entry
LWP59_10965 CDS
T07896
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
aacd
Amycolatopsis acidiphila
Brite
KEGG Orthology (KO) [BR:
aacd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aacd03016
]
LWP59_10965 (thpR)
Enzymes [BR:
aacd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LWP59_10965 (thpR)
Transfer RNA biogenesis [BR:
aacd03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LWP59_10965 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
UIJ62099
LinkDB
All DBs
Position
2247317..2247826
Genome browser
AA seq
169 aa
AA seq
DB search
MLLFSALLPPAQVAESLRVHLEPLQAEVTEPRWTPPAQWHITLGFYGDQDDEEARVDWLT
AALAGHHAPMLRLEGAGTFSRVLYLGVYSEGLTELAAAAGAGEDRPYLPHLTVARTAGDV
PAELPGRLSGFVSEPWTATEVVLMRSERTEHGARYSIVARFPLESHRSG
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgttctcggcgctgctgccgccggcccaggtggccgagtcgctgcgggtccac
ctcgagcccctgcaggcggaggtgaccgagccgcggtggaccccgccggcgcagtggcac
atcaccctcggcttctacggtgaccaggacgacgaggaagcgcgggtagactggttgacg
gcggcgctggccgggcaccacgcgccgatgcttcgcctcgaaggggcgggcaccttctcc
cgggtcctgtacctgggcgtctacagcgaagggctcaccgagctcgccgccgcggccggc
gcgggcgaggaccgcccgtacctgccgcacctgaccgtggcccgcaccgccggggacgtc
ccggcggagctgcccgggcggctctcggggttcgtgagcgaaccgtggacggccaccgag
gtcgtgctgatgcgcagcgagcgcaccgagcacggtgcgcgttactcgatcgtggcacgg
ttccccctcgagtcccaccggtccgggtga
DBGET
integrated database retrieval system
