KEGG   Amycolatopsis acidiphila: LWP59_11685
Entry
LWP59_11685       CDS       T07896                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
aacd  Amycolatopsis acidiphila
Pathway
aacd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aacd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LWP59_11685 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aacd03400]
    LWP59_11685 (uvrB)
DNA repair and recombination proteins [BR:aacd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LWP59_11685 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LWP59_11685 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_22 AAA_16 AAA_5 HEM4 DUF87 P-loop_SecA UPF0730 HIND AIG1 DUF6716
Other DBs
NCBI-ProteinID: UIJ63830
LinkDB
Position
complement(2397057..2399192)
AA seq 711 aa
MLAQSEFRPVSDIPRSGGRFEVVSDYKPAGDQPAAIDELERRIRAGEKDVVLLGATGTGK
SATTAWLIERVQRPTLVMAPNKTLAAQLANELRELFPHNAVEYFVSYYDYYQPEAYIAQT
DTYIEKDSSINDDVERLRHSATMNLLSRRDVIVVASVSCIYGLGTPQSYLDRSSKLEVGG
QVDRDVFLRALVDVQYTRNDIAFARGTFRVRGDTVEIIPAYEELAIRVEFFGDEIDKLYY
LHPLTGDIVREVDEVRIFPATHYVAGPERMEKAIKGIEAELEEQLARLEKQGKLLEAQRL
RMRTSYDIEMMRQVGFCSGIENYSRHIDGRPAGSAPATLIDYFPDDFLLVIDESHQTVPQ
IGGMYEGDMSRKRNLVEYGFRLPSATDNRPLTWEEFSERIGQTVYLSATPGPYEMGQAGG
EFVEQVIRPTGLVDPQVVVKPTEGQIDDLVHEIRERADKDERVLVTTLTKKMSEDLTDYL
LELGIRVRYLHSEVDTLRRVELLRQLRSGDFDVLVGINLLREGLDLPEVSLVAILDADKE
GFLRSGTSLIQTIGRAARNVSGEVHMYADKVTDSMSYAIEETNRRRAKQIAYNEERGLDP
QPLRKKIADILDRVYTEAEDSEREVEVGGSGRNASRGKKPVQGGGGRSSGVLVDRDVSTM
PRAELADLIQSMTDQMMQAARDLQFELAARLRDEIADLKKELRGMDAAGIK
NT seq 2136 nt   +upstreamnt  +downstreamnt
gtgctggcgcagtccgagttccgcccggtctccgacatcccccggagcggtggccggttc
gaggtcgtcagcgactacaagcccgccggcgaccagccggcggccatcgacgagctcgag
cgccggatcagggcgggcgagaaggacgtcgtgctgctgggcgccaccggtaccggcaag
tcggccaccacggcctggctgatcgagcgggtccagcgtccgacactggtcatggcgccg
aacaagacactggccgcccagctggccaacgagctgcgcgaactgttcccgcacaacgcg
gtcgagtacttcgtcagctactacgactactaccagcccgaggcgtacatcgcgcagacc
gacacctacatcgagaaggactcctcgatcaacgacgacgtggagcggctgcgccactcc
gcgacgatgaacctgctctcgcggcgggacgtcatcgtggtcgcgtcggtgtcgtgcatc
tacggcctcggcacgccgcagtcctacctggaccgctcgagcaagctcgaggtcggcggc
caggtcgaccgggacgtgttcctgcgcgcgctcgtcgacgtgcagtacacgcgcaacgac
atcgcgttcgcgcgcggcaccttccgggtgcgcggggacacggtggagatcatcccggcg
tacgaggagctggcgatccgggtcgagttcttcggcgacgagatcgacaagctgtactac
ctgcacccgctcaccggggacatcgtgcgcgaggtggacgaggtccggatcttcccggcc
acccactacgtcgcgggcccggagcggatggagaaggccatcaagggcatcgaggcggag
ctggaggagcagctggccaggctcgagaagcagggcaagctgctggaggcgcagcggctg
cgcatgcgcaccagctacgacatcgagatgatgcgccaggtcgggttctgctcgggcatc
gagaactactcgcggcacatcgacggccgtcccgccgggtccgcgcccgccaccctgatc
gactacttcccggacgacttcctgctggtcatcgacgagtcgcaccagacggtgccgcag
atcggcggtatgtacgagggcgacatgtcgcgcaagcggaacctggtggagtacggcttc
cggctgccgagcgcgacggacaaccggccgctgacgtgggaggagttctccgagcggatc
gggcagacggtgtacctgtcggcgacgccgggcccgtacgagatgggccaggccggcggc
gagttcgtcgagcaggtcatccgcccgacgggcctggtcgacccgcaggtcgtggtgaag
ccgaccgagggccagatcgacgacctggtgcacgagatccgcgagcgggccgacaaggac
gagcgggtgctggtcaccacgctgaccaagaagatgtccgaggacctcaccgactacctg
ctggagctgggcatccgggtgcggtacctgcactcggaggtggacaccctgcggcgggtg
gagctgctgcggcagctgcgctcgggcgacttcgacgtgctggtcggcatcaacctgctg
cgggagggtctcgacctgccggaggtgtcgctggtggcgatcctcgacgcggacaaggag
ggcttcctgcgcagcgggacctcgctgatccagacgatcgggcgcgcggcgcggaacgtc
tccggcgaggtgcacatgtacgcggacaaggtgaccgactcgatgagctacgcgatcgag
gagacgaaccgccgccgggcgaagcagatcgcgtacaacgaggagcgtgggctcgacccg
cagccgctgcggaagaagatcgccgacatcctcgaccgggtgtacaccgaggccgaggac
tccgagcgcgaggtcgaggtggggggctcgggccggaacgcgtcccgcggcaagaagccc
gtccagggcggcggcggccggtcgtcgggggtgctggtggacagggacgtgtcgaccatg
ccgcgggcggagctggcggacctgatccagtcgatgacggaccagatgatgcaagccgcc
cgcgacctgcagttcgaactggcggcccggctccgcgacgagatcgccgacctgaagaag
gaactgcgcggcatggacgcggcgggcatcaagtaa

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