Amycolatopsis acidiphila: LWP59_11685
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Entry
LWP59_11685 CDS
T07896
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
aacd
Amycolatopsis acidiphila
Pathway
aacd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aacd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LWP59_11685 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aacd03400
]
LWP59_11685 (uvrB)
DNA repair and recombination proteins [BR:
aacd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LWP59_11685 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LWP59_11685 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
AAA_16
AAA_5
HEM4
DUF87
P-loop_SecA
UPF0730
HIND
AIG1
DUF6716
Motif
Other DBs
NCBI-ProteinID:
UIJ63830
LinkDB
All DBs
Position
complement(2397057..2399192)
Genome browser
AA seq
711 aa
AA seq
DB search
MLAQSEFRPVSDIPRSGGRFEVVSDYKPAGDQPAAIDELERRIRAGEKDVVLLGATGTGK
SATTAWLIERVQRPTLVMAPNKTLAAQLANELRELFPHNAVEYFVSYYDYYQPEAYIAQT
DTYIEKDSSINDDVERLRHSATMNLLSRRDVIVVASVSCIYGLGTPQSYLDRSSKLEVGG
QVDRDVFLRALVDVQYTRNDIAFARGTFRVRGDTVEIIPAYEELAIRVEFFGDEIDKLYY
LHPLTGDIVREVDEVRIFPATHYVAGPERMEKAIKGIEAELEEQLARLEKQGKLLEAQRL
RMRTSYDIEMMRQVGFCSGIENYSRHIDGRPAGSAPATLIDYFPDDFLLVIDESHQTVPQ
IGGMYEGDMSRKRNLVEYGFRLPSATDNRPLTWEEFSERIGQTVYLSATPGPYEMGQAGG
EFVEQVIRPTGLVDPQVVVKPTEGQIDDLVHEIRERADKDERVLVTTLTKKMSEDLTDYL
LELGIRVRYLHSEVDTLRRVELLRQLRSGDFDVLVGINLLREGLDLPEVSLVAILDADKE
GFLRSGTSLIQTIGRAARNVSGEVHMYADKVTDSMSYAIEETNRRRAKQIAYNEERGLDP
QPLRKKIADILDRVYTEAEDSEREVEVGGSGRNASRGKKPVQGGGGRSSGVLVDRDVSTM
PRAELADLIQSMTDQMMQAARDLQFELAARLRDEIADLKKELRGMDAAGIK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgctggcgcagtccgagttccgcccggtctccgacatcccccggagcggtggccggttc
gaggtcgtcagcgactacaagcccgccggcgaccagccggcggccatcgacgagctcgag
cgccggatcagggcgggcgagaaggacgtcgtgctgctgggcgccaccggtaccggcaag
tcggccaccacggcctggctgatcgagcgggtccagcgtccgacactggtcatggcgccg
aacaagacactggccgcccagctggccaacgagctgcgcgaactgttcccgcacaacgcg
gtcgagtacttcgtcagctactacgactactaccagcccgaggcgtacatcgcgcagacc
gacacctacatcgagaaggactcctcgatcaacgacgacgtggagcggctgcgccactcc
gcgacgatgaacctgctctcgcggcgggacgtcatcgtggtcgcgtcggtgtcgtgcatc
tacggcctcggcacgccgcagtcctacctggaccgctcgagcaagctcgaggtcggcggc
caggtcgaccgggacgtgttcctgcgcgcgctcgtcgacgtgcagtacacgcgcaacgac
atcgcgttcgcgcgcggcaccttccgggtgcgcggggacacggtggagatcatcccggcg
tacgaggagctggcgatccgggtcgagttcttcggcgacgagatcgacaagctgtactac
ctgcacccgctcaccggggacatcgtgcgcgaggtggacgaggtccggatcttcccggcc
acccactacgtcgcgggcccggagcggatggagaaggccatcaagggcatcgaggcggag
ctggaggagcagctggccaggctcgagaagcagggcaagctgctggaggcgcagcggctg
cgcatgcgcaccagctacgacatcgagatgatgcgccaggtcgggttctgctcgggcatc
gagaactactcgcggcacatcgacggccgtcccgccgggtccgcgcccgccaccctgatc
gactacttcccggacgacttcctgctggtcatcgacgagtcgcaccagacggtgccgcag
atcggcggtatgtacgagggcgacatgtcgcgcaagcggaacctggtggagtacggcttc
cggctgccgagcgcgacggacaaccggccgctgacgtgggaggagttctccgagcggatc
gggcagacggtgtacctgtcggcgacgccgggcccgtacgagatgggccaggccggcggc
gagttcgtcgagcaggtcatccgcccgacgggcctggtcgacccgcaggtcgtggtgaag
ccgaccgagggccagatcgacgacctggtgcacgagatccgcgagcgggccgacaaggac
gagcgggtgctggtcaccacgctgaccaagaagatgtccgaggacctcaccgactacctg
ctggagctgggcatccgggtgcggtacctgcactcggaggtggacaccctgcggcgggtg
gagctgctgcggcagctgcgctcgggcgacttcgacgtgctggtcggcatcaacctgctg
cgggagggtctcgacctgccggaggtgtcgctggtggcgatcctcgacgcggacaaggag
ggcttcctgcgcagcgggacctcgctgatccagacgatcgggcgcgcggcgcggaacgtc
tccggcgaggtgcacatgtacgcggacaaggtgaccgactcgatgagctacgcgatcgag
gagacgaaccgccgccgggcgaagcagatcgcgtacaacgaggagcgtgggctcgacccg
cagccgctgcggaagaagatcgccgacatcctcgaccgggtgtacaccgaggccgaggac
tccgagcgcgaggtcgaggtggggggctcgggccggaacgcgtcccgcggcaagaagccc
gtccagggcggcggcggccggtcgtcgggggtgctggtggacagggacgtgtcgaccatg
ccgcgggcggagctggcggacctgatccagtcgatgacggaccagatgatgcaagccgcc
cgcgacctgcagttcgaactggcggcccggctccgcgacgagatcgccgacctgaagaag
gaactgcgcggcatggacgcggcgggcatcaagtaa
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