Amycolatopsis acidiphila: LWP59_21240
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Entry
LWP59_21240 CDS
T07896
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
aacd
Amycolatopsis acidiphila
Pathway
aacd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aacd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LWP59_21240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aacd03400
]
LWP59_21240
Enzymes [BR:
aacd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LWP59_21240
DNA repair and recombination proteins [BR:
aacd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LWP59_21240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UIJ56708
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All DBs
Position
4369717..4370493
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AA seq
258 aa
AA seq
DB search
MRIATWNVNSIAARLPRLLAWLESAKPDVVCLQELKCATDAFPPEVAELGYEVAAYGLGR
WNGVAILSRVGTEDVRRGLADEPVFDDAAEPRAIAATCGGVRLWSVYVPNGRDPGHPHYA
YKLRWLEALRATAAAESAAGRPFAVLGDFNIAPTDEDVWDISLFAGSTHVTEPERKALEA
LRETGLRDVVPRALKYDKPYTYWDYRQLAFPKNNGMRIDLVYANAAFADTVTDAYVDREE
RKGKGPSDHAPVVVDLTR
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacctggaacgtcaactcgatcgcggcccggctcccccggctgctggcc
tggctggagtccgcgaagccggacgtggtgtgcctgcaggagctcaagtgtgccaccgac
gcgttcccgcccgaggtggccgaactcggctacgaggtggccgcctacggcctcggccgg
tggaacggggtcgcgatcctgtcccgcgtgggtaccgaggacgtgcggcgcggcctggcc
gacgagccggtgttcgacgacgccgccgagccccgggcgatcgcggcgacctgtggtggg
gtccggctctggtcggtgtacgtgcccaacgggcgcgatccgggacatccgcactacgcg
tacaagctgcggtggctggaggcgctgcgtgccacggcggccgcggagtccgcggcgggc
cggccgttcgccgtgctgggcgacttcaacatcgcgccgaccgacgaggacgtctgggac
atcagcctgttcgccgggtcgacgcacgtgaccgagccggagcgcaaggcgctggaggcg
ttgcgggaaacgggtttgcgcgacgtcgtgccgcgggcgctgaagtacgacaagccctac
acctactgggactaccggcagctggcgttcccgaagaacaacggcatgcggatcgacctc
gtctacgccaacgccgcgttcgccgacaccgtgaccgatgcctacgtcgaccgggaggag
cgcaagggcaagggcccgtcggaccacgcgcccgtggtcgtggacctgacccgctga
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