Amycolatopsis acidiphila: LWP59_27235
Help
Entry
LWP59_27235 CDS
T07896
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aacd
Amycolatopsis acidiphila
Pathway
aacd03030
DNA replication
aacd03430
Mismatch repair
aacd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aacd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LWP59_27235
03430 Mismatch repair
LWP59_27235
03440 Homologous recombination
LWP59_27235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aacd03032
]
LWP59_27235
03400 DNA repair and recombination proteins [BR:
aacd03400
]
LWP59_27235
Enzymes [BR:
aacd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LWP59_27235
DNA replication proteins [BR:
aacd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LWP59_27235
DNA repair and recombination proteins [BR:
aacd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LWP59_27235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DSBA
BRCT
TerB
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
UIJ57819
LinkDB
All DBs
Position
complement(5560226..5561461)
Genome browser
AA seq
411 aa
AA seq
DB search
MNAAQGFAVIDTETTGILPGYRHRIAEIAVVQLDSRGDVTGEWSTLVNPGRDLGPQAIHG
IRAVDVRRAPRFEQIAGDFVESVRGRVVVAHNWQFDAMHLDAEFDRMGLANPFHSRAGLC
TMRAAGFAVPGSGRSLIECCSAIGLTDLQWHTARDDAMAAALLLRDMLARYPTSVRVTKE
HLDTASWEWPNLPRELVSTVHRTPVGHVEPHFLARLVGRLPHDDEPEVDAYFAMLDDALL
DRQISASEADALLEVAHELGMDKAQALATHHTYLRDLARAAWADGVATREERRDLETVAI
ALGLDPGEVESVLAEERTSDAPTTSSAGLVLRPGDRIVLTGDMKLARAEIVGRATAAGLR
VTGTPSSKTRVVAAADPDSLSGKAKKARQLGVPIVGEDFFLRALDDLSLPN
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcggcccaggggtttgcggtcatcgacaccgagaccaccgggatcttgcccgga
taccggcaccgcatcgccgaaatcgcggtggtccagctggattctcgcggggacgtgacc
ggcgaatggtccactctcgtcaacccgggtcgtgatctggggccgcaggcgatccacggc
atccgcgctgtggacgtgcgtcgcgcgcctcggttcgaacagatcgcaggcgacttcgtc
gagtcggtccggggccgtgtggtggtcgcgcacaactggcagttcgacgccatgcacctc
gacgcggagttcgaccgcatgggtttggccaacccgttccacagccgagcggggctctgc
acgatgcgcgcggccgggttcgccgtgcccggctcggggcgatcgttgatcgaatgctgc
tcggcgatcggtctgaccgacctgcagtggcacacggcgcgcgatgacgcgatggcggca
gcactgctgctacgagacatgctcgctcgctatcccacctcggtgcgcgtcaccaaggaa
cacctcgacacggcgagctgggaatggccgaacctgccccgcgaactcgtctcgaccgtc
caccgcacaccggtcgggcacgtcgagccacatttcctggcgcgcttggtcggacgcctg
ccgcatgatgacgagcccgaggttgatgcgtacttcgcgatgctcgacgacgctctcctc
gaccggcagatctcggcctccgaagcggacgcgcttctggaggtcgcccacgagctgggc
atggacaaggcccaggcactcgcgacacatcacacctaccttcgggatctggcacgcgcg
gcctgggcggatggtgtggcgacccgagaggaacgacgcgacctcgaaaccgtcgccatt
gctcttggcctcgacccgggcgaggtcgagagcgtgctcgcggaggaaaggacaagcgac
gccccgacgacctcaagcgcaggccttgtgctgaggcccggcgacaggatcgtgctgacc
ggtgacatgaagctcgcccgcgcggagatcgtcggtcgcgccaccgcggccgggctccgc
gtcaccggcacccccagcagcaagacccgagtcgtggcggccgcggacccggactcgctg
tccggcaaggcgaagaaggccaggcagctaggagtgcccatcgtaggtgaggacttcttc
ctacgtgctctcgatgacctgtccctgccgaactga
DBGET
integrated database retrieval system
