Amycolatopsis acidiphila: LWP59_28600
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Entry
LWP59_28600 CDS
T07896
Symbol
ligD
Name
(GenBank) non-homologous end-joining DNA ligase
Organism
aacd
Amycolatopsis acidiphila
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Ortholog
Paralog
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
DUF6546
DUF6912
TIGD5_C
TopoV_HHH
Motif
Other DBs
NCBI-ProteinID:
UIJ58062
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Position
complement(5826087..5827106)
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AA seq
339 aa
AA seq
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MPKNGEPVEYQVGERTVRLSSPDKVYFPERGITKRQVAEYYLAVAEPLLAAIGERPTTLK
RYPDGVTGEYFYAKRVPKGAPPYVESVRITFPSGRTAEEVCPTEPAVILWAANLGTFDFH
PWPVRRPDVDHPDELRIDVDPSDETGFDDAVRVAQTVREVLDEAGLTGYPKTSGGRGVHV
RVRIRPEWDFIAVRHAVIALGREVERRLPKLATIAWWKEEREGRVFIDYNQAARDRTIAS
AWSVRGTARATVSTPVTWDQLAEVHPDDFDVLTVPAWYAEHGDAHAGLDEQAFGLETALE
WYERDERDHGLGEMPYPPDYPKMPGEPKRVQPSKARDDT
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaagaacggcgaaccggtcgagtaccaggtgggggagcggacggtcaggctgtcc
agcccggacaaggtctacttccccgagcgcgggatcaccaagcggcaggtggcggagtac
tacctcgccgtcgcggagccgttgctcgcggcgatcggcgaacggccgacgacgctgaag
cgctatcccgacggcgtgaccggcgagtacttctacgccaagcgcgtgcccaagggcgcg
ccgccgtacgtcgagtcggtgcggatcacgttcccgtccgggcgcaccgcggaggaggtc
tgcccgaccgagcccgcggtgatcctgtgggcggcgaacctcggcacgttcgacttccac
ccctggcccgtgcggcggccggacgtcgaccatcccgacgagctgcgcatcgacgtcgac
ccctccgacgagaccggcttcgacgacgccgtgcgcgtcgcgcagaccgtgcgcgaggtg
ctcgacgaggccgggctgaccggctaccccaagacctccggcgggcgtggtgtgcacgtg
cgggtacgcatccggccggagtgggacttcatcgccgtgcggcacgcggtgatcgcactc
ggccgcgaggtcgagcggcggctgccgaagctcgcgacgatcgcgtggtggaaggaagag
cgcgagggccgggtgttcatcgactacaaccaggccgcacgcgaccgcaccatcgcctcc
gcgtggtcggtccgcggcaccgcacgtgccacggtgtcgacacccgtgacgtgggaccag
ctcgccgaggtccatcccgacgacttcgacgtgctcaccgtccccgcgtggtacgccgag
cacggcgacgcgcatgccgggctggatgagcaggcgttcggcctggagaccgcgctggag
tggtacgagcgcgacgagcgtgaccacggcctgggcgagatgccgtatccgcccgactac
ccgaagatgccgggcgagcccaagcgggtgcagccgagcaaggctcgcgacgacacctga
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