Amycolatopsis acidiphila: LWP59_29280
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Entry
LWP59_29280 CDS
T07896
Name
(GenBank) DEAD/DEAH box helicase
Organism
aacd
Amycolatopsis acidiphila
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
UIJ58189
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All DBs
Position
complement(5968515..5971256)
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AA seq
913 aa
AA seq
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MELTAETRAIFVPSDPPRDGVLALWGDGAGPTPVELVLPRGKAFRRTKVDAHVVPLAEAI
PLLLSAPDDAGPAIAAWSAAVGAALTLIARGRVLPTATSGGADAWRVGPLDGADETLVRE
LAAALPPEAHALPLSGLKRVRLHSPETLVRALWDATADVLVRTPAARVVAGGPAFAAPEP
TLLNAADVEWLAAQQPTGAHLQLRVEIREEEPEQYTFAGVLALRSAIDPSLVVDAETLWD
APEAVLSRLGDQVEAQLLIALRRGARVWAPLGRALEAAAPAELILTDDELVELLDTGSAA
LSAAGVEVLWPKGMFSEGLRAKASATPAPGSEAAAAFRMTDLLKFRWQLSLGGETLTEAE
ITALAEAKRPMIRLRGQWVRVDPGMLAKLRRRSTRTLNAAEALAAALTGSLEVDGEQLDF
APPPAVSGLLDRIRHSPSSAVEVPPDLQATLRPYQRTGLGWLARMTELGLGGILADDMGL
GKTIQLIALHLHRRSLGAGPTLVLCPTSLLGNWEREFARFAPSVPVRRFHGGRRHLDEVA
PDEVVLATYGVLRRDREALAEVGWGLLAADEAQHVKNPLSITAKELRRIPGAARVALTGT
PMENRLTELWSIVDWTTPGLLGTLEHFRRTIARPVERNRDRESTERLAATVRPFLLRRRK
TDPDIAPELPRKTETDRFVPLTTEQATLYEAVVRENLAVIRESKGVQRRGQVLKLLTELK
QICNHPAQYLKQAGPLTGRSGKLAAFEELLDVILDEGDSVLVFSQYVQLCKLLQARLGER
GLPVELLSGATSVRRREEMVQRFQSGDIPVFLLSLKAGGVGLNLTRATHVIHYDRWWNPA
VEDQATDRAYRIGQDRPVQVHRLIAEGTLEDRIATVLEGKRGLADAVVGAGEDWITELSD
EQLTDLVRLGEAS
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
gtggagctgacagccgagaccagggcgatcttcgtgccctcggacccgccgcgcgacggc
gtgctcgcgctgtggggtgacggtgccggtcccacgcccgtcgagctcgtgctgcccagg
ggcaaggcgttccggcggaccaaagtggacgcacacgtggtgccgctggccgaggcgatc
ccgctgctgctgtccgcgccggacgacgccggtcccgccatcgcggcgtggtcggcggcc
gtcggcgccgcgctgaccctcatcgcgcgcggtcgcgtgctgcccaccgccacctccggc
ggtgccgacgcctggcgggtcggcccgctcgacggcgcggacgagacgctggtgcgcgag
ctcgccgcggcgctcccgcccgaggcacacgcccttccgttgtcggggttgaagcgcgta
cgcctgcactcgccggaaacgctcgtccgcgcgttgtgggacgcgactgccgacgtgctg
gtccgcacgcccgccgcgcgggtcgtcgcgggcggtcccgcgttcgccgcgccggagccg
acactgctgaacgcggccgacgtcgaatggctcgccgcgcagcagcccaccggcgcccac
ctgcagctgcgcgtcgagatccgcgaggaggagccggagcagtacacgttcgccggagtg
ctggcgctgcgcagtgcgatcgatccgagcctggtggtggacgccgagacgttgtgggac
gcaccggaggcggtgctgtcgcggctgggcgaccaggtcgaggcgcagctgctgatcgcg
ttgcgccgcggtgcgcgagtgtgggcgccgctggggcgtgccctggaggcggcggcgccc
gccgagctgatcctcaccgacgacgaactggtggagctgctcgacacgggcagtgccgcg
ctcagtgccgcgggcgtggaagtgttgtggcccaagggaatgttcagcgaaggcctgcgg
gcgaaggcgagtgcgacccccgcgccgggcagcgaggccgccgcggccttccggatgacc
gacctgctgaagttccgctggcagctcagcctcggcggcgagacgctgaccgaggccgag
atcaccgcactggccgaggcgaagcgcccgatgatccggttgcgcggtcagtgggtccgg
gtcgaccccggcatgctggcgaagctgcggcgccgctccacccgcacgctcaacgcggcc
gaggcactggccgcggcgctgaccgggtcgctcgaggtggacggcgaacagctggacttc
gcgcccccgccggcggtttccggcctgctcgaccggatccgccacagcccgtcgtcggcg
gtcgaggtgcctccggacctgcaggcgacgctgcgcccgtaccagcgcaccgggctgggc
tggctcgcacggatgaccgagctgggcctgggcggcatcctggccgacgacatgggactg
ggcaagacgatccagctcatcgcgctgcacctgcaccgccgttcgctcggtgcgggcccg
acgctcgtgctgtgcccgacctcgctgctgggcaactgggagcgcgagttcgcgaggttc
gcgccctcggttccggtgcggcggttccacggcggacggcggcacctggacgaggtcgcg
ccggacgaggtcgtgctcgcgacgtacggcgtgctgcgccgcgaccgggaagcgctggcc
gaggtcggctggggactgctggccgcggacgaggcgcagcacgtgaagaacccgctctcg
atcacggccaaggagctgcgccggatccccggcgcggcacgggtcgcgctcaccggcacg
ccgatggagaaccggctcaccgagctgtggtccattgtggactggactacccccggcctg
ctgggcacgctggagcacttccggcgcacgatcgcgcgtcccgtcgagcgcaaccgggac
cgggagagcaccgagcggctggccgcgaccgtgcgcccgttcctgttgcgccgccgcaag
accgacccggacatcgcccccgagctgccgcgcaagaccgagaccgaccggttcgtcccg
ctcaccaccgagcaggcgacgctgtacgaggcggtcgtgcgggagaacctggcggtgatc
cgcgagtccaagggcgtgcagcggcgcgggcaggtgctgaagctgctcaccgagctcaag
cagatctgcaaccatccggcgcagtacctcaagcaggccgggccgctcaccgggcgctcg
ggcaagctcgcggcgttcgaggaactgctcgacgtcatcctagacgagggcgacagcgtg
ctcgtgttcagccagtacgtgcagctgtgcaagctgctgcaggcccggctgggcgagcga
gggctgccggtggagctgttgtcgggcgcgacttcggtacgccggcgcgaggagatggtg
cagcggttccagtccggcgacattccggtgttcctgctgtcgctcaaggcgggcggggtc
gggctgaacctgacgagggcgacccatgtcatccactacgaccggtggtggaacccggcg
gtggaggaccaggcgaccgaccgcgcgtaccggatcgggcaggacaggccggtccaggtg
caccggctgatcgccgaaggcacgctggaggaccggatcgcgacggtgctggagggcaag
cgcggcctggccgatgccgtggtgggcgccggggaggactggatcaccgagctgtcggac
gagcagctgaccgacctcgtgcgcctcggcgaggcgtcgtga
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