Amycolatopsis acidiphila: LWP59_29565
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Entry
LWP59_29565 CDS
T07896
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aacd
Amycolatopsis acidiphila
Brite
KEGG Orthology (KO) [BR:
aacd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aacd03032
]
LWP59_29565
03400 DNA repair and recombination proteins [BR:
aacd03400
]
LWP59_29565
Enzymes [BR:
aacd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LWP59_29565
DNA replication proteins [BR:
aacd03032
]
Prokaryotic type
DNA Topoisomerases
LWP59_29565
DNA repair and recombination proteins [BR:
aacd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LWP59_29565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Abdominal-A
Motif
Other DBs
NCBI-ProteinID:
UIJ58242
LinkDB
All DBs
Position
6025320..6026339
Genome browser
AA seq
339 aa
AA seq
DB search
MRLARSDLSAPGIRRRKSGKGFRYFTPEGEPLRDAETLERVQDLVIPPAWRKVWISPRPN
GHIQAVGVDDAGRKQYLYHEQWRRERDEQKHDRVLRLAKCLPKWREQVAADLHERGLTKT
RVLGAALRMLDRGVFRTGSEEYAEANGTRGAATLLKDDVRVRGNEITFCYNAKGSIERTH
SITDEELAKVIKALLRADSGSDRLLVYRDSAGWHEVHADQINERFKEISGDEFTGKDLRT
WHATVLAAAAFAAAGPVKSKRGLQRTQAAVMREVAESLGNTPAVAKRSYVDPRVVHAYEE
GSTVESALRRLGAKGVRGDQERQVLERAVIRLLSKRSHV
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcggctggccaggagtgatctgtcggcgccagggatccggcgccggaaaagcggtaag
ggctttcgctacttcacgcctgaaggcgagccgctgcgcgacgcggagacgctcgagcgc
gtgcaggacctggtgatcccgcccgcgtggcgcaaggtgtggatctcaccgcgcccgaac
gggcacatccaggccgtcggcgtcgatgacgcgggccgcaagcagtacctctaccacgag
cagtggcgccgcgaacgggacgagcagaagcacgaccgcgtgctgcggctggccaaatgc
ctgccgaagtggcgcgagcaggtcgcggccgacctgcacgagcgcgggctgacgaagacc
agggtgctgggggcggcgctgcggatgctcgaccgcggcgtgttccgcaccggcagcgag
gagtacgccgaggccaacggcacccgtggcgcggcgaccctgctcaaggacgacgtgcgg
gtgcgcggcaacgagatcaccttctgctacaacgccaagggcagcatcgaacggacgcac
agcatcaccgacgaggagctcgccaaggtcatcaaggccctcctgcgcgccgattccggt
tcggaccggttgctggtctatcgcgactcggcgggctggcacgaggtgcacgccgaccag
atcaacgagcggttcaaggagatctccggcgacgagttcaccggcaaggacctgcggacc
tggcacgcgacggtgctcgccgcggcggcgttcgcggccgccgggcccgtcaagtccaag
cgcggtctgcagcgcacccaggcggcggtgatgcgcgaggtggcggaaagcctgggcaac
accccggccgtcgccaagcgctcctatgtggatccgcgggtggtgcacgcctacgaggaa
gggtccacggtggagtccgcgctgcggcgcctcggcgccaagggcgtccgcggcgaccag
gagcgtcaggtgctcgaacgggccgtgatccgcttgctgtcgaagcgatctcatgtttga
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