Amycolatopsis acidiphila: LWP59_35775
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Entry
LWP59_35775 CDS
T07896
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
aacd
Amycolatopsis acidiphila
Pathway
aacd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aacd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LWP59_35775 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aacd03019
]
LWP59_35775 (groL)
03110 Chaperones and folding catalysts [BR:
aacd03110
]
LWP59_35775 (groL)
03029 Mitochondrial biogenesis [BR:
aacd03029
]
LWP59_35775 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aacd04147
]
LWP59_35775 (groL)
Enzymes [BR:
aacd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LWP59_35775 (groL)
Messenger RNA biogenesis [BR:
aacd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LWP59_35775 (groL)
Chaperones and folding catalysts [BR:
aacd03110
]
Heat shock proteins
HSP60 / Chaperonin
LWP59_35775 (groL)
Mitochondrial biogenesis [BR:
aacd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LWP59_35775 (groL)
Exosome [BR:
aacd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LWP59_35775 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LWP59_35775 (groL)
Exosomal proteins of breast cancer cells
LWP59_35775 (groL)
Exosomal proteins of colorectal cancer cells
LWP59_35775 (groL)
Exosomal proteins of bladder cancer cells
LWP59_35775 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
UIJ59347
LinkDB
All DBs
Position
complement(7317008..7318639)
Genome browser
AA seq
543 aa
AA seq
DB search
MAKLIAFDEDARRGLERGLNILADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPWEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPISLKRGIE
TAVEAVVEQLHKAAKEVETKEQIAATASISAGDRTIGELIAEALDKVGKEGVVTVEESNT
FGLELELTEGMRFDKGYISGYFVTDAERQEAVLEDPYVLLFGSKISNVKDMLPVLEKVMQ
SGKPLLIIAEDVEGEALATLVVNKIRGTFKSVAVKAPGFGDRRKAILQDIAILTGGQVIS
EDVGLKLENADLNLLGRARKAVITKDETTIVEGAGDADQIQGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
AVLAFDSLRLTGDEATGANIVKVAVEAPLKQIAVNAGLEGGVVVEKVRNLPAGHGLNAAT
GEYEDLLAAGVPDPTKVTRSALQNAASIAALFLTTEAVVADKPEKASAAPAGDPTGGMGG
MDF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggccaaactgatcgcgttcgacgaggacgcccgccgtggactcgagcgcggcctcaac
atcctcgccgatgccgtcaaggtgacgctcggcccccgaggccgcaacgtcgtgctcgaa
aagaagtggggcgcgccgacgatcaccaacgacggcgtctccatcgccaaggagatcgag
ctcgaggacccctgggagaagatcggggccgagctcgtcaaggaagttgccaagaagacc
gacgacgtcgcgggtgacggcaccaccaccgccaccgtgctggcccaggcgctcgtgcgc
gagggcctgcgcaacgtcgccgcgggtgccgaccccatcagcctcaagcgtggcatcgag
acggccgtcgaggccgtcgtcgagcagctgcacaaggccgccaaggaggtcgagaccaag
gagcagatcgctgccaccgcctcgatctcggccggggaccgcaccatcggcgagttgatc
gccgaggcgctcgacaaggtcggcaaggaaggcgtcgtcaccgtcgaggagtcgaacacc
ttcggcctcgagctcgagctcaccgagggtatgcgcttcgacaagggctacatctcgggc
tacttcgtcaccgacgcggagcgtcaggaagccgtcctggaggacccgtacgtccttctg
ttcggctcgaagatctccaacgtcaaggacatgctcccggtcctggagaaggtcatgcag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctggccacgctg
gtcgtcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggcgcccggcttcggt
gaccgccgcaaggccatcctgcaggacatcgcgatcctgaccggtggccaggtgatcagc
gaggacgtgggcctcaagctcgagaacgccgacctgaacctgctgggccgcgcgcgcaag
gccgtcatcaccaaggacgagacgaccatcgtcgagggtgccggcgacgcggaccagatc
cagggccgggtcaaccagatccgcgcggagatcgagaactcggactccgactacgaccgc
gagaagctgcaggagcggctcgcgaagctggccggtggcgtggccgtcatcaaggccggt
gccgcgaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgcggtgcgtaac
gccaaggccgccgtcgaggagggcatcgtcgccggtggtggcgtggctctgctgcaggct
gccgtgctggcgttcgacagcctccgcctgaccggcgacgaggccaccggtgccaacatc
gtcaaggtggcggtcgaggctccgctcaagcagatcgcggtgaacgccggcctcgagggc
ggcgtcgtcgtggagaaggtgcggaacctgcccgcgggtcacggcctcaacgccgcgacc
ggcgagtacgaggacctgctcgcggccggcgtgccggacccgacgaaggtcacccgctcc
gcgctgcagaacgccgcctcgatcgcggcgctcttcctcaccaccgaggccgtcgtggcc
gacaagccggagaaggcctcggccgctccggccggcgacccgaccggtggcatgggcggc
atggacttctga
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