Amycolatopsis acidiphila: LWP59_37475
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Entry
LWP59_37475 CDS
T07896
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
aacd
Amycolatopsis acidiphila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTAD
Trans_reg_C
LysM
Motif
Other DBs
NCBI-ProteinID:
UIJ59651
LinkDB
All DBs
Position
complement(7655275..7658259)
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AA seq
994 aa
AA seq
DB search
MRLLGRVARGLLAVILLAALVAGLPVALICGVGWPLPDHLPNLDEIGSVLMAPMSTRFLL
DVLACLAWLIWLVFVLDVVACAVEVARGARWPELRRQTGPVRRVAAVLVGALLVAVLGRT
ATAAPAAPAEAGRPVGHAPVVATAPAWTTAVASEHTGTPQSRTQPAAEPGTERVRPPEGG
VHDSLWRIAQRCLGDGDRWPEIWALNEGSPQPGGRVLTNPHLIHPGDTLRLPATSPPPTP
PASPPAPPEPTPTSPAPAAEPAPPAPSTTTPPPFTPPFSEPAPATADPAADTAADEPAGG
AVTWGSGEVFVSLGLAAAVSALLVLARRRRHARYRPGSGQRDDDLPVAPVVYQLRLAHLR
AQHHDEDIELEAETDEPGDTAADDPATHEDQSEPVRSGAASRSRRAETGTEGQVRVLTPR
VRRVIGAATTPGTDGGPAEPPSVVDIALDPTAPGAGGETVNADAGKGTQVAFDQARVHGL
GLVGPGGYAAARALLLTLLTATPDGGSVPRVFVPAADLARLLGVPGPVTGLPDTVTVVAD
LDTALTALDAPQPSRPAVLIATPPREPDQQARLQQLLDNNGQHGLTALLLGQWRPGVTAY
VTAGGIISATDPGLGEPLRGTCAFTLPETATRDLLAFLRTAQPRDDTSGVSDAAEPQGHA
PAPRQAPTPPEEGAPSPLEHTGDGPDRLEITSGPPIPEPAPAEASGEPDSEPRPLPPRTA
DTGLGKPAPLVLTVFGAPALHWRPDPARSEDTRDLSGELSSRPVELLVYLAVHPGGVSRD
GIVDALWPDEPPRNPASVLRTVLSRIRRALDSATGRAVGELVVAEHGQYRLDPAVVEVDY
WGFAEAVTARRTATTSERRTDAYEAIVTHYGGPLAEGLEAEWLVAAREATRRDALDAVAA
LARARVADDPDYTLDLLETARAFDPHNELLYRDIMRLQHALGRHDAISRTLTLLRTRLGE
VDAKPTADTVDLAQRLRARDTGIPVGDFSRSTAP
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
gtgcggctgctgggccgtgtggcgcgcggcctgctcgcggtcatcctgctggccgcgctc
gtggctggtcttcccgtagcgctgatctgcggcgtgggatggcccttgcccgaccatttg
ccgaacctggacgagatcgggtcggtgttgatggcgccgatgtcgacacgttttctgctc
gacgtgctcgcctgcctggcctggctgatctggctcgtgttcgtcctcgacgtcgtggcc
tgtgcggtcgaggtcgcccggggtgcccggtggccggaactgcgacggcagacgggtccg
gtgcggcgcgtcgcggccgtgctcgtcggcgccctgctggtcgccgtcctgggccgcacc
gccaccgccgcacccgctgcccccgccgaggccgggcggcccgtcggccacgccccggta
gtcgcgaccgcgcccgcctggacgacggcggtcgccagcgagcacaccggcaccccgcag
tcccgaacccagcccgcggccgagcccggaaccgagcgggtccggccaccggagggtgga
gtgcacgactcgctgtggcggatcgcgcaacgctgtctgggcgacggggaccggtggccg
gagatctgggcgctcaacgagggcagcccccagcccggcggacgcgtgctgaccaacccg
cacctgattcaccccggcgacaccctccgcctccccgcgaccagcccaccgcctaccccg
cctgcttcaccaccggcacccccggaaccgacgcccacgagcccagctcctgccgccgaa
ccagcaccgccggcgccgagcacgaccacgccacctcccttcacgccacctttctcggag
cccgccccggccactgcggatcccgccgccgatacggcggccgacgaacccgctgggggc
gcggtgacctggggcagtggcgaggtgttcgtcagcctgggcctggcggcggcggtcagt
gccctgcttgtgctcgcgcgacggcgacgccacgcgcgctaccggcccggcagcggccag
cgtgacgacgacctgcccgtcgcgcccgtggtgtaccagctgcgcctggcccatctacgc
gcccagcatcacgacgaagacatcgaactggaggccgagaccgacgagccgggcgacacc
gcggccgacgacccggccacgcacgaggaccagtctgaacccgtccgctccggcgcggca
tcgcgatcgaggcgcgcggaaaccgggaccgagggccaggtgcgggtgctcacgccgcgc
gtccggcgagtgatcggcgccgccacgacccccggcaccgacggcggaccggcggagccg
ccgtcagtcgtggatatcgctctcgacccgaccgcgcccggtgctggcggcgagaccgtc
aacgccgacgcgggcaaagggacgcaggtcgcgttcgaccaggctcgcgtgcatggcctc
ggcctggttgggcctggcggctacgccgcggcccgcgccctgctgctcactctccttacc
gccacgcccgacggcggatcggtgccgagggtgttcgtgcccgctgccgatctggcccgg
ctgctcggcgtgccggggcccgtcacgggcctgccggacacggtcaccgtcgtggccgac
ctggacaccgcactgaccgccctcgacgccccgcaaccgtcccggcccgccgtcctgatc
gcgacgccgccccgcgagccggaccagcaggcgcggttgcagcagctgctcgacaacaac
ggtcagcacggcctcaccgcgctgctgctcggccaatggcgtcccggggtgaccgcctac
gtcaccgccggcgggatcatctccgcgaccgaccccggcctcggcgaacccctgcgcggc
acctgcgccttcaccctgcccgagaccgccacccgcgacctgctggccttcttgcgcacc
gcgcagccccgcgacgacaccagtggcgtcagcgacgccgccgaacctcaaggccacgcc
cctgcgccgcgccaagcgccgacgccaccagaggagggtgctccttcccctctggagcac
accggagacggccctgatcgtctggaaatcacttcgggtccacccataccggaaccggct
cccgccgaggccagcggcgaacccgacagcgaaccgcgcccgctgccgccacggacggca
gatacgggcctggggaagcccgcaccgctggtgttgacggtgttcggcgccccagctctg
cactggcggcccgatcccgcccgatccgaggacacccgcgacctgtccggcgaattgagc
agccgcccggtcgaactgctggtgtatctcgcggtccatcccggaggggtgtcccgggac
gggatcgtcgacgccctgtggcccgacgagccgccccgcaatcccgccagcgtgctgcgc
accgtgctctcccggattcgccgcgcccttgacagcgccaccggccgcgccgtcggcgag
ctggtggtggccgagcacggccagtaccggctcgaccccgcggtggtggaggtggactac
tggggcttcgccgaggcggttaccgcacgccgcaccgccaccacgtccgagcggcggacc
gacgcctacgaggcgatcgtgacgcactatggcggaccgctggccgagggcctggaggcg
gagtggctcgtcgccgcccgggaagcgacccgccgcgacgccctcgacgccgtggccgcg
ctcgcccgcgcccgggtcgccgacgaccccgactacaccctggacctgctggagaccgcg
cgggcattcgatccgcacaacgagttgctctaccgcgacatcatgcgcctgcagcacgcc
ctcggccggcacgacgcgatctcccgcaccctgaccctcctgcggacccggctgggcgaa
gtcgacgccaagcccaccgcagacaccgtcgacctcgcccagcggctacgcgcccgcgac
accggcataccggtcggcgacttctcgcgatccacggcgccatga
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