Amycolatopsis acidiphila: LWP59_40015
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Entry
LWP59_40015 CDS
T07896
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
aacd
Amycolatopsis acidiphila
Pathway
aacd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aacd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LWP59_40015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aacd03400
]
LWP59_40015
Enzymes [BR:
aacd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LWP59_40015
DNA repair and recombination proteins [BR:
aacd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LWP59_40015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UIJ60088
LinkDB
All DBs
Position
complement(8129344..8130117)
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AA seq
257 aa
AA seq
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MQIGAHVRDDDPLSAAQERAAEVVQFFLADPQGWKKPVPTPSAAEIEAAGVAVFIHSPYV
VNVASMNNRIRIPSRKAVAQHAAAAGEIGAKGLIVHGGHVRKEEDPEQGLLNWGKLFERQ
AEEGGFGVPILIENTAGGDGAMARHLDMLARLWDVVGDLGAGFCLDTCHAFAAGWELDGI
VAKVKAITGRIDLVHLNNSRDEFGSTRDRHANVVHGGGTIDPEVLVAVAKEAQAPVIVET
PSDGQADDIAYLREALG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcggtgcccatgtccgcgatgacgacccgttgtccgccgcccaggagcgcgcc
gccgaggtcgtgcagttcttcctggccgatccgcagggctggaagaagccggtgcccacg
ccgtccgcggccgagatcgaggccgccggggtcgcggtcttcatccattcgccgtacgtg
gtgaacgtggcgtcgatgaacaaccggatccgcatcccctcgcgcaaggcggtggcgcag
cacgcggcggcggcgggcgagatcggcgcgaaggggctcatcgtgcacggcgggcacgtg
cgcaaggaggaggatcccgaacagggcctgctgaactggggcaagctgttcgagcgccag
gccgaagagggcgggttcggcgtgccgatcctgatcgagaacaccgccggcggcgacggg
gcgatggcccggcacctggacatgctcgcccggctgtgggacgtggtcggcgacctcggc
gccgggttctgcctggacacctgtcacgcgttcgccgcgggctgggagctcgacggcatc
gtcgcgaaggtcaaggccatcaccggccggatcgacctcgtgcacctgaacaactcgcgc
gacgagttcggctccacccgcgaccggcacgcgaacgtcgtgcacggcggcggcacgatc
gaccccgaggtgctggtcgcggtcgcgaaggaggcccaggcgcccgtcatcgtcgagacg
ccgtccgacggccaggccgacgacatcgcctacctgcgggaagcgctcggctga
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