Acetobacter aceti: A0U92_00815
Help
Entry
A0U92_00815 CDS
T04735
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aace
Acetobacter aceti
Pathway
aace03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aace00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A0U92_00815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aace03021
]
A0U92_00815
03400 DNA repair and recombination proteins [BR:
aace03400
]
A0U92_00815
Enzymes [BR:
aace01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A0U92_00815
Transcription machinery [BR:
aace03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A0U92_00815
DNA repair and recombination proteins [BR:
aace03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A0U92_00815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Biotin_lipoyl_2
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AQS83543
UniProt:
A0A1U9KCK2
LinkDB
All DBs
Position
192518..196699
Genome browser
AA seq
1393 aa
AA seq
DB search
MNELMKILGQTGQAATFDQIKIQLASSEQIRSWSFGEIKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRMKFRGIVCEKCGVEVTLAKVRRERMGHIQLASPVAHIWFLKSL
PSRIGLMVDMTLKDLEKVLYFESYLVLEPGTSPLKQFSLLTEEQYLDVLDEHAEDGIEVG
IGAEAIKKLLERIDCDAEKVKLRQELKETTSEAKRKKLVKRLKLIEAFAESGCKPEWMIL
DIVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIVRNEKRML
QESVDALFDNGRRGRAITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELKLHQCGLPKKMALELFKPFIYSKLEKYGHATTIKAAKRMVEKERPEVWDILEEVIREH
PVMLNRAPTLHRLGIQAFEPILVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYLSLETPEFGATLDRNEYDDKTGELLKK
GAPSFGSINEVEYALSTGALKLHDKIRMRLEMTGEDGKPYAETVVTTPGRVLIAQILPKS
SSVPFSLINKQLTKKNVSDVIDAVYRHCGQKEAVIFCDRMMSLGFRHAARAGISFGKDDM
IIPHEKKELVDRTAAEVKEFEQQYQDGLITAGERYNKVVDAWSRCTDEVQAAMTKELSRA
EIGKPINSVWMMSHSGARGSPAQMKQLAGMRGLMAKPSGEIIEQPIIANFKEGLSVLDYF
TSTHGARKGLADTALKTANSGYLTRRLVDVAQDCIIVENDCGTERGLTIRAVMDGGEVVS
SLSERILGRTLAADVVNPTTGEVIFRRNHLVEEADAEIIENSAVETVLIRSVLTCDSRVG
VCGHCYGRDLARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRGAEQSMVEAS
RDGNVTIRNRNVVHNSQNVPIVMARNCEIILADENGTERARYRVPYGARLLVEEGQAVAR
NQKMAEWDPYTLPIITEKAGTVEYLDLIDSITLVERMDEVTGLTSKVVVDYKQASKGVDL
RPRLQLKDSNNNVIKLDNGNDARYFLSPDSLLSVENGAQVHAGDVLARIPREGSKTRDIT
GGLPRVAELFEARRPKDHAIIAENEGRVEFGKDYKSKRRVIVKNDETGEETEYLVPKGKH
VSVQEGDFVQKGDPLVDGPRVPHDILKVMGVEALSDYLVNEIQDVYRLQGVKINDKHIEV
IVRQMLQKVEVLEPGDTTYLVGETVDRIEFEGENTKRLNAGDRPAIAMPVLQGITKASLQ
TQSFISAASFQETTRVLTEAATAGKVDTLNGLKENVIVGRLIPAGTGSVMNKLRAVAARQ
DRQRLEHGSEAAE
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaactcatgaaaatccttggccagactggtcaggcagccaccttcgaccagatc
aagatccagcttgcgtccagcgagcagatccgttcctggtcgtttggcgagatcaagaag
ccggagacgatcaactatcgtacgttcaagccggaacgtgatggtctgttctgcgcgcgt
atctttggtcccatcaaggactacgagtgcctgtgcggcaaatacaagcgcatgaagttc
cgcggcattgtctgcgagaagtgcggcgttgaagtcacgctggcgaaagtgcgtcgcgag
cggatgggtcacatccagcttgcaagcccggtcgcgcatatctggttcctgaagtcactg
ccaagccgtatcggcctgatggtcgatatgacattgaaagatctggaaaaggttctctac
ttcgagagctatctggttctggagccgggcacgtcaccgctgaagcagttcagccttctg
acggaagagcagtatctcgatgtgctggacgagcacgcggaagacggcattgaagtcggc
atcggcgcggaagcgatcaagaagctgcttgagcgcatcgactgcgacgccgagaaggtc
aagctccgtcaggaactgaaggagacgacatccgaggccaagcgcaagaagctggtcaag
cgtctgaagctgatcgaagcgttcgccgaaagcggttgcaagccggaatggatgattctg
gacatcgtaccagtgattccgcccgagctgcgtccgctggttccgctggatggcggtcgt
ttcgcgacatccgatctgaacgatctgtatcgccgcgtcatcaaccgtaacaaccgtctg
aagcggctcatggagctgcgtgcgccggacatcatcgtccgtaacgaaaagcgcatgctg
caggagtctgttgacgccctgttcgacaacggtcgtcgcggccgcgccatcactggcgcc
aacaagcgtccgctgaagtcgctgtccgacatgctgaaaggcaagcagggacgtttccgt
cagaacctgctcggtaagcgcgtcgattattccggtcgttcggttatcgtggtcggacct
gagctgaaactgcatcagtgcggtcttcccaagaagatggcgctggagctgttcaagccg
ttcatctactccaagcttgagaaatacggtcacgccaccaccatcaaggctgcgaagcgc
atggtggaaaaggagcgtccggaagtctgggacatccttgaagaagtgatccgcgagcat
cccgtgatgctgaaccgtgcgccgacgctgcatcgtctcggtatccaggcgttcgagcca
atccttgtcgaaggcaaggccattcagcttcacccgctggtctgcaccgctttcaacgcg
gactttgacggtgaccagatggccgtccacgtgccgctgtcgctcgaagcccagcttgaa
gcccgtgtgctgatgatgtcgaccaacaacatcctcagccctgcgaacggcaagccgatc
atcgtgccgtcgcaggatatcgttctcgggctttactatctcagccttgagacgccggaa
ttcggtgcgacgcttgatcgcaatgaatacgatgacaagaccggtgagcttctcaagaaa
ggtgctccgtctttcggttcgatcaacgaagtcgaatacgccctgtcgacaggggctctg
aagcttcatgacaagattcgtatgcgccttgagatgaccggcgaagatggcaaaccgtat
gccgagacggttgtcaccacaccgggacgtgttctgattgcgcagattctgccgaaaagc
agctcggtgccgttctctctgatcaacaagcagttgactaagaagaacgtgtccgacgtg
atcgacgcggtctaccgtcactgtggtcagaaagaagctgtgatcttctgtgaccgcatg
atgtcgctcggtttccgccacgcagcgcgcgccggcatctcgttcggcaaggatgacatg
atcatcccgcacgagaagaaggaactggtggatcgcaccgccgccgaggtcaaggagttc
gagcagcagtatcaggatggtctgatcacggctggcgagcgctataacaaggtggttgac
gcctggtcgcgctgcacggatgaagtgcaggccgcgatgaccaaggaactgtcgagagca
gagatcggcaagccgatcaactcggtctggatgatgagccactccggcgcgcgtgggtcg
ccagcacagatgaagcagttggccggtatgcgtggtctgatggccaagccgtctggtgaa
atcatcgaacaaccgatcatcgccaacttcaaggaaggcctgtcggttctcgattacttc
acctcgacccacggtgcccgtaaaggacttgctgataccgcgctgaagacggccaactct
ggttatctgacacgtcgtctggtcgacgtggcgcaggattgcattatcgtcgagaacgat
tgtggcaccgaacgtggtctgaccatccgtgcggtgatggatggcggtgaggttgtttcc
tcgctttctgaacggattctcggtcgtacgctggcggctgacgtcgtcaatccgaccacg
ggtgaggtcattttcaggcggaatcatcttgttgaagaggctgacgccgaaatcatcgag
aattccgctgtcgagacggttctgatccgctcggttctgacctgtgacagccgtgttggc
gtctgcggccactgttatggccgtgatcttgcgcgtggaacgcccgtcaatatgggtgag
gctgttggtgttatcgctgcccagtccatcggtgaaccgggaacgcagctcaccatgcgt
accttccatatcggtggtgcggcccagcgtggtgccgagcagtcaatggttgaggcctca
cgtgatggtaacgtgacgatccgcaatcgcaacgtggtgcataattcccagaacgtgccg
atcgtcatggcgcgtaactgtgaaatcattcttgctgacgagaatggcacggagcgcgcg
cgttaccgtgtaccttatggtgcgcgactgcttgtcgaggaaggtcaggctgtcgcccgc
aaccagaagatggccgagtgggacccgtacaccctgccgatcatcaccgagaaggcggga
acggtcgaatatcttgacctgatcgactccatcacgcttgtcgagcgtatggatgaagtg
acgggtctgacttcgaaagtggtcgtggattacaagcaggcatcgaagggtgtcgacctg
cgtccgcgtctgcagctgaaagacagcaacaacaacgtcatcaagctcgataacggcaat
gatgcgcgttacttcctgtcgcctgactcgctgctctctgttgagaatggcgcacaggtt
catgcgggtgacgtgctggcgcgtattccgcgtgaaggctccaagacgcgtgacatcacc
ggtggtctgccgcgtgttgccgaactgttcgaggcgcgtcgtccgaaggatcacgccatc
atcgccgagaacgaaggtcgcgtggaattcggcaaggattacaagtcgaagcgccgtgtc
attgtgaaaaacgatgagacaggtgaagagaccgaatatctggtgccgaagggcaagcac
gtgtccgttcaggaaggcgactttgtccagaagggcgatccgctggtcgacggtccccgt
gtcccgcatgacattctgaaggtcatgggtgtcgaagctctgtccgattatctcgtgaac
gagattcaggacgtgtatcgactgcagggcgtgaagatcaacgacaagcacatcgaggtg
atcgttcgccagatgctgcagaaggtcgaggttctggagccgggcgacaccacgtatctt
gttggcgagacggtggatcgtatcgagttcgagggggaaaacaccaaacgcctcaacgcg
ggtgatcgccctgcgatcgccatgccggtgctgcagggcatcaccaaggcttcgttgcag
acacagtccttcatctcggcggcttccttccaggagaccacacgtgtgctcacagaagct
gctacggcaggcaaggtggacacgctgaacggcctgaaagagaatgtcattgtcggccgt
ctgatacctgcaggcacaggaagtgtgatgaacaaactgcgtgctgttgcggcgcgtcag
gatcgtcagcgtcttgagcatgggagtgaagctgccgagtaa
DBGET
integrated database retrieval system
