Acidipropionibacterium acidipropionici CGMCC 1.2230: ASQ49_04330
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Entry
ASQ49_04330 CDS
T04523
Name
(GenBank) Fis family transcriptional regulator
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
aaci
Acidipropionibacterium acidipropionici CGMCC 1.2230
Brite
KEGG Orthology (KO) [BR:
aaci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aaci03016
]
ASQ49_04330
Enzymes [BR:
aaci01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ASQ49_04330
Transfer RNA biogenesis [BR:
aaci03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ASQ49_04330
Prokaryotic type
tRNA splicing ligases
ASQ49_04330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ALN14627
LinkDB
All DBs
Position
982591..983802
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AA seq
403 aa
AA seq
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MSIFPVPLSGTDNTLMWAEEAGIEEAARAQLRNVAALPWTRGVRVMPDVHYGLGATVGSV
IAMSQAVAPAAVGVDIGCGMTAVRTNLRPDQLPEDLAGLRHQIERAVPVGFSMHNGEART
IARHPDLKARYQTVMGEFQQLYARDLTASARTGRAEAKAGGQVGTLGGGNHFIELCSGDD
GRVWVTLHSGSRGTGNQLAQVHMGIAQGLAHNQNLADRDLAVFIAGSPQMEHYLHDLWWA
QAYALLNRDVMLAAICDELSRAIDGIAFEDPIRCHHNYVAVETHDGEELIVTRKGAIRAG
AGDMGVIPGSMGTGSYIVTGLGNETSYQSASHGAGRRMSRRAAKRTFTADDLAVQTAGIE
CRKDTGVIDEIPAAYKDIDDVIAAQTDLVSVVARLQTLLCVKG
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtccatttttccggtgccgttgtccggcaccgacaacaccttgatgtgggccgaggag
gccggtatcgaggaggccgctcgagctcagctgcgcaatgtggcggcgctgccctggacc
cgcggcgtccgggtgatgcccgacgtccactacggcctgggcgccaccgtcggatcggtc
atcgcgatgagccaggccgtcgccccggccgccgtgggcgtcgacatcggctgcggcatg
acggcggtgcgcaccaacctgcgccccgaccagctgcccgaggacctcgcggggctgcgg
caccagatcgagcgggctgtgccggtgggattctccatgcacaacggcgaggcccggacc
atcgcgcggcaccccgatctcaaggcccggtaccagacggtgatgggcgagttccagcag
ttgtacgcccgggatctcactgcgtccgcgcgcaccggacgggccgaggcgaaggccggc
gggcaggtgggcaccctgggcgggggaaaccacttcatcgagctgtgctccggcgacgac
ggccgggtgtgggtgacgctgcactccggatccaggggaaccggcaaccagctcgcccag
gtccacatgggcatcgcccagggactggcccacaaccagaacctggccgaccgcgacctg
gccgtgttcatcgcgggctcgccgcagatggagcactacctccacgacctgtggtgggcg
caggcctacgccctgctcaaccgcgacgtcatgctcgccgccatctgcgacgaactgtcc
cgggccatcgacggcatcgccttcgaggaccccatccgctgccaccacaactacgtcgcc
gtggagacccacgacggggaggagctcatcgtcacccgcaagggcgccatccgcgccggc
gcaggagacatgggcgtcatccccggatccatgggcaccggttcctacatcgtgaccggc
ctgggcaacgagacctcctaccagtccgcctcccacggggccggacgccggatgtcgcgg
cgcgcggcaaagcggaccttcaccgccgacgacctggccgtccagaccgccggcatcgaa
tgccgtaaggacaccggcgtcatcgacgagatccccgccgcctacaaggacatcgacgac
gtgatcgccgcccagaccgacctcgtcagcgtcgtggcccgcctccagacgctgctgtgc
gtcaagggctga
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