Acidipropionibacterium acidipropionici CGMCC 1.2230: ASQ49_13990
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Entry
ASQ49_13990 CDS
T04523
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
aaci
Acidipropionibacterium acidipropionici CGMCC 1.2230
Pathway
aaci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ASQ49_13990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaci03400
]
ASQ49_13990
DNA repair and recombination proteins [BR:
aaci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ASQ49_13990
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ASQ49_13990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ALN16185
LinkDB
All DBs
Position
complement(3108812..3109561)
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AA seq
249 aa
AA seq
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MPTYRDRAVVLRTHKLGEADRIITMLTRDHGKVRAVARGIRRTSSKFGGRLDPFNLIDIQ
LVIGRNLDVVAQVESLHAYSAPLRLDYPLFTAAEVMVEAADHLVPVEKEPSPAQYRLLAG
ALRVLGAGTTDGPRPAAMVLDSYLLRALAAAGYAPDLVDCVRCGAPGPHPGFSPSLGGMV
CVNCQPPGTPHPNSETIGYLQALLTGDWAATRTVAPVRVREGSGLVAAFVSWHMERGLRS
LPIMDRTSD
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgcctacctaccgggaccgcgccgtggtgctgcggacgcacaagctcggggaggccgac
cggatcatcaccatgctcaccagggatcacggcaaggtgagggctgtggcccgtggcatc
cggcggacgtcaagcaaattcggcggccggctcgatccgttcaatctcatcgacatccag
ctcgtcatcggccgcaacctggacgtcgtcgcccaggtggagagccttcacgcctactcg
gcaccgttgcggctggactacccgctgttcaccgccgccgaggtgatggtggaggccgcc
gaccacctggtgccggtggagaaggagccctcccccgcccagtaccggttgctggccggt
gcgctgagggtgctcggggccggcaccacggacggtcccaggcccgcggcgatggtgctg
gactcatacctcctccgggccctggcggccgccggatacgcccccgatctggtggactgc
gtccgctgcggggcccccggcccccatccgggattctccccgagcctgggcgggatggtg
tgcgtcaactgccagccaccgggcactccccaccccaactcggagaccatcggctatctc
caggccctgctcaccggcgactgggccgccaccaggacggtggccccggtgcgggtcaga
gaaggctcgggcctggtcgcggccttcgtctcctggcacatggagaggggtctgcgctcc
ctgccgatcatggaccggaccagcgattga
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