Acidipropionibacterium acidipropionici CGMCC 1.2230: ASQ49_14140
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Entry
ASQ49_14140 CDS
T04523
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aaci
Acidipropionibacterium acidipropionici CGMCC 1.2230
Pathway
aaci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASQ49_14140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaci03019
]
ASQ49_14140
03400 DNA repair and recombination proteins [BR:
aaci03400
]
ASQ49_14140
Enzymes [BR:
aaci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASQ49_14140
Messenger RNA biogenesis [BR:
aaci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ASQ49_14140
DNA repair and recombination proteins [BR:
aaci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ASQ49_14140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HTH_Cmi2_C
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
ALN16212
LinkDB
All DBs
Position
3139294..3141432
Genome browser
AA seq
712 aa
AA seq
DB search
MSDLRSQGLDILRRLTGRSDADFHPGQWEAIEALVAGHRRALVVERTGWGKSAVYFVAAL
LQRRAGFGPALIVSPLLALMRDQVAAAERAGVRAAAISSANVTEWDEIRARLADDSVDVL
LVSPERLINPRFATEQLPELVERMGMLVIDEAHCISDWGHDFRPDYRRIRDLVAGLPADV
PVLATTATANSRVVTDVAEQIAPADRGGAPDDGVFVLRGPLARDSLRLGVLTLPRPELRL
AWLCEHLGELNGSGIIYCLTISSAEDTARALTEAGHEVRAYTGRTDPDERTELEGALKDN
RVKALVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGRAGRATDSADVLLLPGPEDR
DIWRYFATSSMPSQERADAVLAALAEGSTLSTPALEARVDIRRSPLELLLKVLAVDGAVE
RVSGGWRATGTPWVYDAERYGRIAAARTAEQDAMERYEHLDSCRMAFLTTQLDDPDASAC
GRCDVCAGQWYPTDVDPDQQSRARDTLDRVGVPIDPRRSWPSGLDRLGVALKGRIPPGEQ
AEEGRVVARLSDLGWGGPLRDLFRSDEQGVPLDTELPAPLAGACLRVLAEWDWPRRPVAV
VCVPSVSRPHLVSSVAEGIARAGRLAYLGALDLAPGAGLLDARVNSAFRVRDLSDRFWVG
EQLAAGLEGLSGAPVLLVDDLVTSRWTIAVAARLLRCAGAGAVLPFALGLSG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctgaggagtcagggcctggatatcctgcgccgtctcaccggccggagcgac
gccgacttccatcccggccagtgggaggcgatcgaggccctggtggccgggcaccgccgg
gccctggtggtggagcgcaccggctggggcaagtcggcggtatacttcgtcgcggccctg
ctgcagcgccgagccggcttcgggcccgccctcatcgtctccccgctgctggccctgatg
cgcgaccaggtggccgccgccgaacgcgccggggtgcgggccgccgcgatctccagcgcc
aacgtcaccgagtgggacgagatccgggcacgcctggccgacgactccgtcgacgtgctg
ctggtctcccccgagcggctcatcaatccgcggttcgccaccgaacagctgcccgagctg
gtggagaggatgggcatgctcgtcatcgacgaggcccactgcatctccgactgggggcac
gacttccgccccgactaccgccggatccgcgatctggtggccgggctgccggccgacgta
cccgtcctggcgaccaccgccaccgccaactcgcgggtggtcaccgacgtagccgagcag
atcgccccggccgatcggggcggcgcccccgatgacggcgtcttcgtgctgcgcggcccc
ctggcccgcgactcgctgcgcctgggggtgctgacgctgccgcgccccgagctgcgactg
gcctggctgtgcgagcacctgggcgaactcaacggctcggggatcatctactgcctcacc
atctcctcggccgaggacaccgcacgggcactcaccgaggccggacacgaggtgcgcgcc
tacaccggccgcaccgaccccgatgagcgcaccgagctggagggcgcgctcaaggacaac
cgggtcaaggcgctggtggccaccagcgccctgggcatgggtttcgacaagcccgatctg
ggattcgtcgtccacctgggagcgccgagctccccggtcgcctattaccagcaggtgggt
cgcgcgggccgcgccaccgactcggcggacgtcctgctgctgcccggccccgaggaccgc
gacatctggcgctacttcgccacctcctcgatgccctcccaggaacgggccgacgccgtc
ctggccgccctggcggagggcagcacgctgtccaccccggccctggaggcccgggtcgac
atccgtcgcagccccctcgaactgctgctcaaggtgctggccgtcgacggggccgtcgag
cgggtgagcggtggatggcgggccaccgggactccatgggtctacgacgccgagcgctac
gggaggatcgcggcggccagaacggccgagcaggacgccatggagcgctacgagcatctg
gacagctgccggatggcattcctcaccactcagctcgacgacccggacgcgtccgcctgc
ggacgctgcgacgtctgcgccggccagtggtaccccaccgatgtggatcccgatcagcag
tcccgggcccgggacaccctggaccgggtgggcgtgccgatcgatccccggcgcagctgg
cccagcggactggaccgcctcggtgtggcgctcaaggggcgcatcccgccgggtgagcag
gccgaggaggggcgggtcgtcgcccggctgtcggatctggggtggggaggcccgctgcgc
gatctgttccgctccgacgagcagggcgtccccctggacaccgagctgccggccccgctg
gccggtgcctgcctgcgggtcctggcggaatgggactggccacggcgccccgtcgccgtg
gtctgcgtcccctcggtgagccgcccccacctggtgagttcggtggccgaggggatcgcc
cgggccggacgcctggcatacctgggagccctggatctggccccaggagccggtctgctg
gacgcgcgggtgaactcggcattccgggtccgcgacctgtctgacaggttctgggtcgga
gagcagctcgccgccggtctggagggactgtcgggcgcccctgtcctgctggtcgacgac
ctggtcaccagccgctggacgatcgcagtggccgcccgcctgctgcgctgtgccggtgcc
ggggccgtcctgcccttcgccctcgggctgtcgggctga
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