Acidipropionibacterium acidipropionici CGMCC 1.2230: ASQ49_14545
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Entry
ASQ49_14545 CDS
T04523
Name
(GenBank) ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
aaci
Acidipropionibacterium acidipropionici CGMCC 1.2230
Pathway
aaci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASQ49_14545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaci03019
]
ASQ49_14545
03009 Ribosome biogenesis [BR:
aaci03009
]
ASQ49_14545
Enzymes [BR:
aaci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ASQ49_14545
Messenger RNA biogenesis [BR:
aaci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ASQ49_14545
Ribosome biogenesis [BR:
aaci03009
]
Prokaryotic type
rRNA processing factors
ASQ49_14545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
PCB_OB
DUF5969
Motif
Other DBs
NCBI-ProteinID:
ALN16280
LinkDB
All DBs
Position
complement(3216831..3219536)
Genome browser
AA seq
901 aa
AA seq
DB search
MVQDTSENSISGDEVTQPQEPTRRRHRAASRPAGAPAATATTTLTTGVVTAAAGSGGSVI
TADTDTSDLPRPPVGRRRSTRTAASPAAAKKTAAAKQPAAPKTEEPSTPKAEKADRTEKT
APETEEAPRTSRRRTARGSSTTSARRTGGRGRAKPEEAADGGSPTFSDAEAIDAALERAA
REAAEKGRGVEGTLANPFGDAGARSTGDILDSLAAEIGGEEAPVKRRRRRTSASAEREVP
ASAAAQEQDDSGHGAAREDQDEEPEETLDRAAEDEADDSADSDEDSHGARRRRRRGGRRR
RRSDSEEGGQEAEGSEEPAGAEKDSGTRGSGQKGSQDKGSQDANADDKGSAGQNGDGEAQ
EESGVTRRRRRRRRRRGEDTSGAEDDPSDVVVKVREPRPRHSVTDEVTGIEGSTRMEAKK
QRRREGRAAGRRRSAVLTEAEFLARRESVERRMVVRQAEEYSQLAVLEDGVLVEHYVDRS
SAASSIGNVYLGKVQNVLPSMEAAFIDIGRGRNAVLYAGEVDWNHFGKEGEHKRIEQVLK
SGDQVLVQVSKDPVGAKGARLTSHISIPGRYIVYSPGGHLSGISRKLADTERKRLKKIID
ENIPSDASVIVRTAAEGASEEDLVRDIERLKSQWQVIERKAASAHAPVLLYSEPDLTVRI
IRDLFTADFTELVVAGNGGPDDAYDTIKDYIDHVAPDLGDRLTRWDTETQGDPFAKYRVD
EAIAKALERKVFLPSGGSLVIDRTEAMTVIDVNTGKFTGTAGNLEATVAANNLEAAEEIV
RQLRLRDIGGIIVVDFIDMVLPANRELLVRRLVECLGRDRTRHQVSEVTSLGLVQMTRKK
IGTGLAEAFTEECQECGGRGYHRHTEPVDSQAPADGGERSHKGRANRSHSGKHSNHNSKK
N
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggtccaggacacgtccgagaactccatctccggtgacgaggtgacacagccccaggag
ccgacaaggaggcgccatcgggccgcctcccgtccggcgggggcccctgcggccaccgcg
acgacgaccctgacgacgggggtggtcacagccgcggccggatcgggcggcagcgtcatc
accgcggacaccgacacctccgatcttccccggccgcctgtcgggcgccgcaggtcgacc
cgtacggccgcctccccggcggctgcgaagaagacggccgcggcgaagcagccagcggcc
ccgaagaccgaggaaccctcgacccctaaggctgagaaggccgacaggaccgagaagacc
gcgccggagaccgaggaggcgcctcgcacctccaggcgccgcaccgcccgcggctcgtcg
accacctctgcgcggcgcacgggtggtcggggccgggcgaagccggaggaggccgccgac
ggcggatccccgacattctccgatgcggaagccatcgacgccgccctggagagggccgcc
agggaggctgccgagaagggacgcggtgtcgagggcaccctggccaacccgttcggggac
gccggcgcacggtccaccggtgacattctcgactcgctggccgctgagatcggtggcgag
gaggcgccggtgaagcggcgccgccgtcgcacatccgcgtcggcggagcgcgaggtaccg
gcttccgctgctgcgcaggagcaggacgactccggccatggagcggcccgggaggaccag
gacgaggagccggaggagacgctcgaccgggccgccgaggacgaggccgatgactcggcg
gactccgacgaggactcccacggagcccgccggcgtcgtcgtcgtggcgggcgtcgtcgc
cgtcgcagcgactcggaggagggcggccaggaggccgagggctccgaggagccggccggg
gccgagaaggattccggtacccggggttccggtcagaagggctcccaggacaagggctcc
caggacgccaatgccgatgacaagggctcggccggtcagaacggcgacggcgaggcccag
gaggagtcgggtgtgacccggcgtcgtcgtcgccgtcgtcgccgccgcggggaggacacc
tcgggcgccgaggacgatcccagcgacgtggtggtcaaggtgcgcgaaccccgcccccgc
cactcggtgaccgatgaggtgaccgggatcgagggctccacccggatggaggcgaagaag
cagcgccgccgcgagggccgtgccgccggtcgccggcgcagcgccgtgctcaccgaggcc
gagttcctggcccgcagggagtcggtggagcgccgcatggtggtgcgccaggccgaggag
tactcccagctggccgtcctcgaggacggcgtgctggtcgagcactacgtggaccgcagt
tcggccgcgtcgtcgatcggcaacgtgtacctcggcaaggtgcagaacgtgctgccctcg
atggaggccgccttcatcgacatcgggcgcggacgcaacgccgtcctctacgccggcgag
gtggactggaaccacttcggcaaggagggcgagcacaagcgcatcgagcaggtgctcaag
tccggcgaccaggtgctggtccaggtctccaaggacccggtcggcgccaagggagcccgt
ctgacgagccacatctcgatcccgggacgctacatcgtctactcgccgggcggccacctg
tcggggatctcccgcaagctcgccgacaccgagcgcaagcgcctgaagaagatcatcgac
gagaacatcccgtcggacgcatcggtcatcgtgcgcaccgcggcggagggtgcctcggag
gaggacctggtccgcgacatcgagcggctgaagtcccagtggcaggtcatcgagcgcaag
gccgcctcggcgcacgcgccggtgctgctgtactcggagccggatctgacggtgcggatc
atccgcgacctgttcaccgccgacttcaccgagctcgtggtggcgggcaacggcggcccc
gatgatgcctacgacaccatcaaggactacatcgatcacgtcgcacccgatctcggcgac
cggctgacccgctgggacaccgagacccagggggacccgttcgcgaagtaccgggtcgac
gaggcgatcgccaaggcgctggagcgcaaggtgttcctgccctcgggcggctccctcgtg
atcgaccggaccgaggcgatgaccgtcatcgacgtcaacaccgggaagttcaccggaacc
gccggcaacctggaggccacggtcgccgccaacaacctggaggcggccgaggagatcgtc
cgtcagctgcggctgcgcgatatcggcgggatcatcgtcgtcgacttcatcgacatggtg
ctgccggccaaccgggagctgctggtgcggcgtctcgtggagtgcctgggccgggaccgt
acccgtcaccaggtctccgaggtgacctccctgggcctggtgcagatgacccgcaagaag
atcggcaccgggctggcggaggccttcaccgaggagtgccaggagtgcggcggccgcgga
tatcaccggcacaccgaaccggtggactcccaggcccccgcggacggcggggagaggtcc
cacaaaggacgggcgaaccgttcccattcaggcaagcattcgaaccacaattccaagaag
aattga
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