Aggregatibacter actinomycetemcomitans NUM4039: AANUM_0171
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Entry
AANUM_0171 CDS
T04531
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
aacn
Aggregatibacter actinomycetemcomitans NUM4039
Pathway
aacn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aacn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AANUM_0171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aacn03021
]
AANUM_0171
03400 DNA repair and recombination proteins [BR:
aacn03400
]
AANUM_0171
Enzymes [BR:
aacn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AANUM_0171
Transcription machinery [BR:
aacn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AANUM_0171
DNA repair and recombination proteins [BR:
aacn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AANUM_0171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
BAS47402
LinkDB
All DBs
Position
complement(168134..168400)
Genome browser
AA seq
88 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLILTAARRARQLQLHTREPLVPEDNDKPTVIALREIEKGLIN
NEILDAQDRHEHLVQERVEVNAVSLLSE
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtaaccgtacaagacgcagtagaaaaaattggtaaccgtttcgatttaatt
ttaaccgccgcccgtcgcgcaagacaattacagttgcatacgcgtgaacctttggtgccg
gaagataatgataaaccgaccgttatcgcactgcgtgaaattgaaaaaggtttaattaat
aacgaaattttagatgcgcaagatcgtcatgaacatttggtgcaggaaagagtggaagtg
aacgccgtttctttgctatccgaataa
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