Aggregatibacter actinomycetemcomitans NUM4039: AANUM_0433
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Entry
AANUM_0433 CDS
T04531
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aacn
Aggregatibacter actinomycetemcomitans NUM4039
Pathway
aacn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aacn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AANUM_0433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aacn03019
]
AANUM_0433
03016 Transfer RNA biogenesis [BR:
aacn03016
]
AANUM_0433
Enzymes [BR:
aacn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AANUM_0433
Messenger RNA biogenesis [BR:
aacn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AANUM_0433
Transfer RNA biogenesis [BR:
aacn03016
]
Prokaryotic type
tRNA degradation factors
AANUM_0433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
OB_RRP5_4th
KH_SLS1_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
BAS47664
LinkDB
All DBs
Position
complement(416890..419019)
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AA seq
709 aa
AA seq
DB search
MNPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVVAKKDVKEGQDFFPLTV
NYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFFNEIQVVATVVSVN
PQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINGQFVLNPTMNEQKQSRLDLVVAG
TDKAVLMVESEADILTEEQMLAAVVYGHQQQQVVIEAIKELVAEVGKPRWDWVAPEPNTA
LINKVKALAEARLGDAYRITEKQSRYEQIDAIKADVIAQITAEDEEISEGKIIDIFTALE
SQIVRGRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSAIFTRGETQALAVATLGTERD
AQIIDELTGERSDHFLFHYNFPPYSVGETGMIGSPKRREIGHGRLAKRGVAAVMPTLAEF
PYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEEDKFVVLSDI
LGDEDHLGDMDFKVAGTREGVTALQMDIKIEGITAEIMQIALNQAKSARMHILGVMEQAI
PAPRADISDFAPRIYTMKIDPKKIKDVIGKGGAVIRALTEETGTSIDIDDDGTVKIAAVD
KNAVQDVMARIEDITAEVEVGATYKGKVIRLADFGAFVAIVGNKEGLVHISQIAEERVEK
VSDYLQVGQEVMVKVVEIDRQGRIRLTMKDLVPKQDTVQQPADNLFEQE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccaattgttaaacagtttaaatacggccaacataccgtaaccttagaaaccggt
gcgatcgcccgtcaggcaaccgcagcggtcatggcaagcatggacgatacgaccgtattc
gtgactgtggttgctaaaaaagatgtgaaagaaggtcaggatttcttcccgttgaccgtt
aattatcaagaacgtacttatgccgccggtcgcattcccggcggtttcttcaaacgtgaa
ggtcgtccgtccgaaggcgaaaccttaattgcccgtttaatcgaccgtccgattcgtccg
ttattcccggaagggtttttcaacgaaattcaagtggttgccaccgtggtatcggtaaat
ccgcaaatcagcccggatttagtggcaatgatcggtgcgtccgccgcgttatctttatcc
ggtgtgccgtttaatggtccgatcggtgcagcgcgtgtcggttttattaacggtcaattc
gtgctaaacccaaccatgaacgagcaaaaacaaagccgtttggatttagtggtggcgggc
accgataaagccgtgttaatggtggaatccgaagcggatattttaaccgaagaacaaatg
ttggcggcggtggtttatggtcatcagcaacaacaagtggtcattgaagccatcaaagaa
ctcgttgccgaagtgggcaaaccacgttgggattgggttgcgcctgaaccgaacacggcg
ttaattaacaaagtgaaagccttggcagaagcccgtttaggcgatgcctatcgtatcacc
gaaaaacaatcccgctacgagcaaatcgatgccattaaagcggatgtgattgcacaaatc
accgctgaagatgaagaaatcagcgaaggcaaaattattgatatttttaccgcacttgaa
agccaaatcgtgcgtggccgcattatcgcaggcgaaccgcgtatcgatggccgtactgtt
gacaccgtgcgtgcattggatatttgcaccggcgtattaccgcgtacccacggctccgcg
atttttacccgtggtgaaacccaagccttggcggtggcgactttaggtaccgagcgtgat
gcgcaaattattgatgaattgaccggcgaacgttccgatcatttcctattccactataac
ttcccgccgtattccgtaggtgaaaccggtatgatcggttcaccgaaacgtcgtgaaatc
ggtcatggtcgtttggcaaaacgcggtgtggcggcagtcatgccaacgcttgctgaattt
ccttatgtggtgcgcgtagtatccgaaatcaccgaatcgaacggttcttcttctatggcg
tccgtatgtggtgcttctcttgccttaatggatgccggtgtgccgattaaagcggcagta
gcaggtatcgccatgggtttggtgaaagaagaggataaatttgtagtgctttccgatatt
cttggcgatgaagatcacttaggtgatatggacttcaaagttgccggtacccgtgaaggt
gtgactgcattgcaaatggatatcaaaattgaaggtatcactgcagaaattatgcaaatt
gccctgaatcaggcgaaaagtgcgcgtatgcacattcttggcgtgatggaacaagcgatt
ccggcaccacgtgcggatatttccgattttgcaccgcgtatttacactatgaagatcgat
ccgaagaaaatcaaagatgttatcggtaaaggcggtgcggttattcgtgcgctgaccgaa
gaaaccggcacttccattgatattgatgacgatggtacggtgaaaattgctgcggtagat
aaaaatgcagtgcaggatgtaatggcacgcattgaagacatcactgccgaagtggaagtc
ggcgcaacttacaaaggtaaagtcatccgtttggcggattttggcgcgtttgtggcaatc
gtcggtaacaaagaaggtttagttcatatttcacaaatcgctgaagaacgtgtagaaaaa
gtgagcgattatctacaagtaggacaagaagtgatggtgaaagtggtcgaaatcgatcgc
cagggtcgtatccgtttaactatgaaagaccttgtgcctaaacaagatactgttcaacaa
cctgccgacaacctttttgaacaggagtga
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