Aggregatibacter actinomycetemcomitans NUM4039: AANUM_0530
Help
Entry
AANUM_0530 CDS
T04531
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aacn
Aggregatibacter actinomycetemcomitans NUM4039
Pathway
aacn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aacn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AANUM_0530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aacn03021
]
AANUM_0530
03400 DNA repair and recombination proteins [BR:
aacn03400
]
AANUM_0530
Enzymes [BR:
aacn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AANUM_0530
Transcription machinery [BR:
aacn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AANUM_0530
DNA repair and recombination proteins [BR:
aacn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AANUM_0530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
BAS47761
LinkDB
All DBs
Position
complement(501966..506234)
Genome browser
AA seq
1422 aa
AA seq
DB search
MKDLVKFLKAQSKTAEDFDVIKIGLASPDMIRSWSYGEVKKPETINYRTFKPERDGLFCA
RIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPVAHIWFLKS
LPSRIGLLLDMPLRDIERVLYFESYIVIEPGMTDLERGQLLTEEQYLDAEDRWQDEFDAK
MGAEAIQALLRGIDLEAECENLREELQETNSETKRKKITKRLKLLEAFLQSGNKPEWMVM
TVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLIAPDIIVRNEKRML
QESVDALLDNGRRGRAITGSNRRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGP
YLHLHQCGLPKKMALELFRPFIYAKLESRGYATTIKAAKKMVEREDAIVWDILAEVIREH
PILLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQLE
ARALMMSTNNILSPANGDPIIVPSQDVVLGLYYMTREKVNGKGEGMLLQDPREAEKAYRT
GQAELHSRVKVRITEYVKNDAGEFEPKTTLTDTTIGRAILWMIAPKGMPFSLFNQTLGKK
AISKLINESYRRLGLKASVMFADQIMYTGFAYAARSGSSVGIDDMVIPAKKYEIISAAEE
EVAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSSEEVINREGKPEKQASF
NSIFMMADSGARGSAAQIRQLAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDLVIIEDDCGTHEGIVMTPLIEGGDEKVPLRELV
LGRVAAEDILKPGTEDVLIPRNTLLDEKLCDVLDENSVDSVKVRSVVTCNTDFGVCAKCY
GRDLARGHLINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSVQVKNNGTLR
LANAKFVTNNEGKLVLTSRNTELTVVDNFGRTKEHYKVPYGAILSKGDHQEVNAGETIAN
WDPHTMPVISEVGGFVKFVDIVDGLTVTRQTDELTGLSSIVVQDVGERATAGKDLRPAIK
LVDEKGNDVLVSGTDVAAQYFLPSKAIVTLDDGAEVHVGDPLARIPQESVGTKDITGGLP
RVADLFEARKPKEPAILAEISGIVSFGKETKGKRRLLITPTEGEVYEEMIPKWRQLNVFE
GEMVQCGDLISDGAETPHDILRLRGVHAVTEYIVNEVQEVYRLQGVKINDKHIEVIVRQM
LRKAIVTKAYDSEFLEGEQVEVARVKIVNRKREAEGKPPVEYERELLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGFAYHRNRHKNPTAIADDE
VPVRLSAADEEEIASEFVMTSEDASASLTEMLNMVEEDNHAE
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttagttaagtttttaaaagcacaatcaaaaactgctgaagattttgatgtg
attaaaatcggtttagcctcacctgacatgatccgttcttggtcatacggtgaagttaaa
aagcctgaaacaatcaactatcgtacttttaaaccggaacgtgacggtcttttctgtgcc
cgtattttcggaccggtaaaagattacgaatgtttgtgcggtaagtacaaacgcttaaaa
caccgtggcgtgatttgtgaaaaatgtggcgttgaagtaacccaaaccaaagtacgtcgt
gaacgtatgggccacatcgaattagcctctccggtggcgcacatttggtttttaaaatcc
ctgccgtcccgtatcggtttgttgttagatatgccgttgcgtgatattgaacgcgtgctt
tattttgaatcttacattgtgatcgaaccgggtatgaccgatctggaacgcggtcagtta
ttaaccgaagagcaatatcttgacgcggaagaccgttggcaggatgagttcgacgcaaaa
atgggtgcggaagcgatccaagcgttattgcgcggtatcgatttggaagcggaatgcgaa
aatttacgtgaagaattacaagaaaccaattccgaaaccaaacgtaagaaaatcacgaaa
cgcttaaaattattggaagctttcctacaatccggcaacaaaccggaatggatggtgatg
accgtattgccggtacttccgccggacttacgtccgttagtgccgttagacggtggtcgt
tttgccacttccgatttgaacgatttatatcgtcgtgtgattaaccgtaataaccgttta
aaacgtttattggatcttatcgcgccggatattatcgtgcgcaacgaaaaacgcatgttg
caggaatccgtggacgcgttattggataacggtcgtcgcggtcgtgccatcaccggttct
aaccgtcgtccgttaaaatcattggcggatatgattaaaggtaaacaaggtcgcttccgt
caaaacttgttgggtaaacgtgttgactactccggtcgttccgtaatcaccgtgggtcca
tacttgcacttacaccaatgtggtttgccgaagaaaatggcattggaattattccgtccg
tttatctacgcgaaattagaaagtcgtggttatgcaacaacgattaaagcggcgaaaaaa
atggtggaacgcgaagacgccatcgtttgggatattctggcggaagtgattcgcgaacat
ccgattctgttgaaccgtgcgccgacacttcaccgtttgggtatccaagcctttgaacca
atcttaatcgaaggtaaagcgatccaattacacccgcttgtttgtgcggcgtttaacgcg
gacttcgacggtgaccaaatggcggtgcacgttccgttgacgcttgaagcgcaattagaa
gcgcgtgcgttaatgatgtccaccaataacattctttctccggcgaacggcgatccgatt
atcgttccgtcacaagacgtggtgttagggctttactacatgacccgcgaaaaagtgaac
ggtaaaggtgaaggtatgctattgcaagatccgcgcgaagcggaaaaagcctatcgtacc
ggtcaggcggaattgcattcccgcgtgaaagtgcgtattaccgagtatgtgaaaaacgac
gccggtgagtttgaaccgaaaactacgttaaccgacaccactatcggtcgtgctattttg
tggatgatcgcgccgaaaggcatgccgtttagcttgtttaaccaaactcttggcaaaaaa
gccatctctaagttaatcaacgaaagctatcgtcgtctaggcttaaaagccagcgtcatg
ttcgccgaccaaatcatgtacaccggttttgcttatgcggcacgctccggttcctccgtg
ggtatcgacgacatggtgattccggcgaagaaatacgaaattatttctgcggcggaagaa
gaagttgccgaaattcaggaacaattccaatccggtcttgtgacagcgggcgaacgttat
aacaaagtgattgatatttgggcggcagcgaacgaacgcgttgctaaagccatgatggaa
aacctgtcttcggaagaagtgattaaccgtgaaggtaaaccggaaaaacaagcctctttc
aacagcatctttatgatggcggattccggtgcccgtggttccgcagcacagattcgtcag
ttggcgggtatgcgtggtttgatggcgcgtccggacggttccattatcgaaaccccaatc
actgcaaacttccgtgaagggttgaacgttttacaatactttatttctacccacggtgcg
cgtaaaggtttggcggataccgcgttgaaaaccgcgaactccggttacttaacccgccgt
ttggttgacgtggcacaagatttggtcatcatcgaagatgactgtggtacgcacgaaggt
atcgtgatgaccccgttaatcgaaggtggcgacgaaaaagttcctctgcgcgaattggta
ttaggtcgtgtggcggcggaagacatcttaaaaccgggtacggaagacgtattaattcca
cgcaataccttgcttgatgaaaaactttgtgatgtgttggatgaaaactccgtggacagc
gtaaaagtgcgttccgtcgtaacctgtaacaccgatttcggcgtttgtgcgaaatgttac
ggtcgtgacttggcgcgcggtcacctgattaaccaaggtgaagcggtaggtgttatcgcg
gcacaatctattggtgaaccgggtacacagttaaccatgcgtacgttccacatcggtggt
gcggcatccgcggcagctaaagaatccagcgtacaagtgaaaaacaacggcacattgcgt
ttagccaatgcgaaattcgtgacgaacaacgaaggtaaattggtgctgacttcccgtaat
acggaattgaccgttgtggataatttcggacgtaccaaagagcactataaagtgccttac
ggtgcgattttaagcaaaggcgatcaccaagaagtgaatgcaggcgaaaccatcgctaac
tgggatccgcataccatgccggttatttccgaagtgggcggtttcgtgaaattcgtggac
atcgtggacggtttaaccgtcacccgtcaaaccgacgaactcaccggtctttcctctatc
gtggtacaagacgtgggtgaacgtgccacagccggtaaagatctgcgccctgcaatcaaa
ctagttgatgagaaagggaatgacgtattggtgtcgggcaccgacgttgcggcacaatat
ttcttgccaagtaaggctatcgtgaccttggatgacggcgcggaagtgcatgtgggtgac
ccgttggcacgtattccgcaagaatctgtcggaacaaaagatattaccggtggtcttccg
cgcgtggcggacttatttgaagcgcgtaaaccgaaagaacctgccatcttggcggaaatt
tccggtatcgtgtccttcggtaaagaaaccaaaggtaaacgtcgcttattgattaccccg
acggaaggtgaagtgtacgaagaaatgatcccgaaatggcgtcaactgaacgtattcgaa
ggtgaaatggtacaatgcggcgatttaatctccgacggtgcggaaacgccacatgacatc
ttacgtttacgaggtgtccatgccgtaaccgaatacatcgttaatgaggtacaggaagtt
taccgcttacaaggggtaaaaattaacgataaacacatcgaagtgatcgtacgccaaatg
ttgcgtaaagctatcgttaccaaagcctacgactccgaattcctcgaaggggaacaagtg
gaagtggcgcgtgtgaaaatcgttaaccgcaaacgcgaagcggaaggcaaaccgccggtt
gaatatgaacgcgaattattgggtatcaccaaagcgtccttggcaaccgagtccttcatc
tctgcggcctccttccaggaaaccacccgtgtgttaacggaagcggcggttgccggtaaa
cgcgatgaattacgtggcttgaaagaaaacgtcatcgtgggtcgtttgatcccggcgggt
accggttttgcgtatcaccgaaatcgccataaaaacccgacagccatcgcggatgacgag
gtgccggtaagattatcggcggcagatgaagaagaaattgcttccgaattcgtgatgacc
tccgaagatgcgtcagcaagtttaaccgaaatgttaaacatggtagaagaagacaaccac
gcagaataa
DBGET
integrated database retrieval system
