Aggregatibacter actinomycetemcomitans NUM4039: AANUM_1352
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Entry
AANUM_1352 CDS
T04531
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
aacn
Aggregatibacter actinomycetemcomitans NUM4039
Brite
KEGG Orthology (KO) [BR:
aacn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aacn03016
]
AANUM_1352
Enzymes [BR:
aacn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AANUM_1352
Transfer RNA biogenesis [BR:
aacn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AANUM_1352
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
DUF2274
EPCAM-Trop-2_C
Motif
Other DBs
NCBI-ProteinID:
BAS48583
LinkDB
All DBs
Position
complement(1312689..1314668)
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AA seq
659 aa
AA seq
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MFQENPLLAQLKQQIHDSKERVEGTVKSTDKAYGFLECDKKSYFIAPPAMKKVMHGDKIS
ATIEKQGDKEQAEPEALIEPMLTRFIAKVRFNKDKKLQVLVDHPNINQPIGAAQNISVKE
ELQEGDWVVATLKTHPLRDDRFFYAQITQFICHADDELAPWWVTLARHEQPREPVQGQDQ
YEMQDKETRENLTALHFVTIDSETTQDMDDALYIEPLTSNNEQTGWQLVVAIADPTAYIS
LDSQIEKDAKQRCFTNYLPGFNIPMLPRELSDELCSLKPNETRPALVCYIQTDLQGNIIA
PAKFVLANVQSKAKLTYSRVSDYLEGKENAWQPENQDMAQQIHWLHQFSLARTQWRKTHA
LLFKEKPDYSFVLGENGKVQEIKAEYRRIANQIVEESMIIANICAAQFLQENLQCGIFNT
HSGFDKKSLENAHHFLLASLANEENKAELQARYAVEHLATLNGYCQMRHDIEPIEGDYLE
FRLRRFLTFAEFKAELAPHFGLGLNGYATWTSPIRKYSDMVNHRLIKAYLANRPYEKPEE
SVLVRLQEARRQNRLVERDIADWLYCRYLADKVAKKAEFEAEVQDVTRGGLRVLLLANGA
SIFIPASTLHDNKEEIVINTDEIAFYVKDQRLYKIGDILRVQLTEVKEATRSIVGMVIK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagaaaatcccttactcgcccaattaaaacaacaaattcacgacagcaaagaa
cgtgtggaaggcacggtgaaaagcaccgacaaggcttacggttttttagaatgtgataaa
aaaagctattttattgcgccgccggcaatgaaaaaagtaatgcacggcgacaaaatcagc
gccactattgaaaaacagggcgacaaagaacaagcggaaccagaggccctgatcgaaccg
atgctcacccgttttatcgccaaagtgcggttcaataaagacaagaaattacaggtattg
gtagatcacccgaatatcaatcaacccattggcgccgcgcaaaacatatccgtaaaagaa
gaattacaggaaggcgattgggtggtggcaacacttaaaactcatccgctgcgtgatgat
cgttttttctatgcacaaattacccaatttatttgccacgccgatgatgaattggcgcct
tggtgggtcacccttgcccgtcacgagcaaccacgtgagcctgttcaggggcaagatcaa
tatgaaatgcaggataaagaaacgcgcgaaaatctgaccgcacttcacttcgtcaccatc
gactcggaaaccacgcaggacatggacgatgccttgtatatcgagccgttaacctcaaat
aatgagcaaaccggctggcaattggttgtggcgattgccgatccgacggcttatatcagc
ttagattcgcaaatcgagaaagatgctaagcaacgctgtttcactaattatctgccgggc
ttcaacatcccaatgttgccgcgcgaattgtccgacgagctttgttccttaaaacctaac
gaaacccgtcccgcactggtttgttatattcaaacggatttacagggcaatatcatcgcg
ccggcaaaatttgtgttagcgaatgtacaatcgaaagctaaattgacttatagtcgggtg
tccgattatttagaaggcaaagaaaatgcctggcagccggaaaaccaagacatggcacag
caaattcattggctgcatcaatttagccttgccagaacacaatggcgcaaaacccatgcc
ctattgtttaaagaaaaaccggattattctttcgtgttgggagaaaacggcaaggtgcag
gaaattaaggcggaatatcgccgtattgccaaccaaatcgtggaagaatccatgattatc
gccaatatctgcgccgctcaatttttacaggaaaacctgcaatgcggtattttcaatacg
cacagcggattcgacaaaaaatccctggaaaacgcccatcattttctgttagccagttta
gcaaacgaagaaaacaaggcggaactacaagcccgctatgccgtagagcatttagcgacg
ctaaacggctactgccaaatgcgtcacgatattgaaccgattgaaggggattatttggaa
ttccgcctgcgtcgattcttaacttttgcagaatttaaagcggaattggcaccgcacttt
gggctgggattgaacggttacgccacttggacatcaccgattcggaaatattccgacatg
gtgaatcatcgcctgattaaagcttatttagccaatcgcccttatgaaaaaccggaagaa
agcgtgctggtgcgcttgcaagaagcccgccgccaaaatcgcctggtggaacgtgacatt
gccgattggctatattgtcgctaccttgccgataaagttgccaaaaaagcggaatttgaa
gcagaagtacaagatgttacccgtggcggtttacgtgttttattgttggcaaacggcgcg
tccatatttattcctgcctcaaccttgcacgacaacaaagaggaaattgttatcaatacc
gatgaaattgccttctatgtcaaagatcaacgtctttacaagatcggagatattttacgc
gtacaactcacggaagtgaaggaagcaacacgtagtattgtggggatggtcatcaagtaa
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