Aggregatibacter actinomycetemcomitans NUM4039: AANUM_1448
Help
Entry
AANUM_1448 CDS
T04531
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
aacn
Aggregatibacter actinomycetemcomitans NUM4039
Pathway
aacn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aacn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AANUM_1448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aacn03400
]
AANUM_1448
DNA repair and recombination proteins [BR:
aacn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AANUM_1448
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AANUM_1448
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_30
AAA_22
DUF7018
DUF87
Motif
Other DBs
NCBI-ProteinID:
BAS48679
LinkDB
All DBs
Position
1420541..1422583
Genome browser
AA seq
680 aa
AA seq
DB search
MSEKINTKPFILHSHFKPSGDQPQAIAKLAENLEDGLAHQTLLGVTGSGKTFTIANVIAQ
LNRPAMVLAPNKTLAAQLYAEMKDFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASI
NDQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDPDSYLKMMLHLQQGAIINQRQILAK
LAELQYTRNDQAFQRGTFRVRGEIIDIFPAESDDRAVRIELFDGEIERLSLFDPLTGSSF
GTVPRFTVYPKTHYVTPRERILDAIEKIKLELAQRREYFTKENKLLEEQRISQRTQFDIE
MMNELGYCSGIENYSRYLSDRNEGEPPPTLFDYMPSDAILIIDESHVTVPQIGGMYRGDR
SRKETLVEYGFRLPSALDNRPLRFEEFERLAPQTIYVSATPGPYELEKSGGEIIDQVVRP
TGLLDPQIEIRPVSIQVDDLLSEARHRADKNERVLVTTLTKKMAEDLTDYLDEHGIRVRY
LHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSL
IQTIGRAARNLHGKAILYADNITKSMEKAITETNRRREKQAKYNEAQGIMPQALNKKVGE
LLDIGQGANQKAKANKQRGKTVAEPTALYTTLKSPKEYQQQIKKLEQQMYKFAQDLEFEK
AAATRDQLQQLRESFMLSSE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaaattaacactaaaccttttattcttcattcccatttcaaaccctccggc
gaccaaccccaggccatcgcaaaattagccgaaaatttagaagatggcttggcacatcaa
accttgcttggggtaacaggttcaggcaaaacctttaccattgccaatgtgattgcgcaa
ttgaatcgccctgcgatggtgttggcaccgaacaaaacccttgccgcccaactttatgcc
gaaatgaaggattttttcccggaaaatgcggtggaatattttgtttcttactatgattat
tatcagcccgaagcctatgtgccgagtagcgatacttttattgagaaagacgcgtctatt
aatgatcaaattgaacaaatgcgactttccgccacaaaatctttcttagaacggcgcgat
actattgtagtggcgtccgtgtccgctatttatggcttaggggaccccgattcctattta
aaaatgatgctgcatttgcaacaaggcgcgattattaatcagcgccaaatcttggcaaaa
ttggcagagttgcaatatacccgtaacgatcaggcgtttcagcgcggaacgttccgtgtg
cggggagaaattattgatattttcccggcggaatcggacgatcgagcggtacgtatcgaa
ttatttgatggtgaaatcgaacgcttgagtttatttgatccgctcaccggcagcagcttc
ggcacggtgccgcgctttaccgtttatccgaaaacccactatgttacaccgcgtgagcga
attttagacgccatcgaaaaaattaaactggaattggcgcaacggcgggagtatttcact
aaagaaaataaattattggaagaacaacgtatcagccaacgtacccaatttgatattgag
atgatgaatgaactcggttattgctcgggcattgaaaactattcccgctatttatcagat
agaaatgagggcgaaccgccaccgaccttatttgattatatgccgtctgacgcaattttg
attattgacgaatcccacgtcaccgtgccacaaatcggtgggatgtatcgcggcgatcgc
tcccgtaaagaaaccttggtggaatatggttttcgtctgccttctgcgttggataaccgt
ccgttacgttttgaagaatttgaacgtttggcaccgcaaaccatttatgtttccgccaca
ccgggaccgtatgaactggaaaaatccggtggggaaattatcgaccaagtggtgcgtccg
acaggtttgcttgatccgcaaattgaaattcgcccggtatctattcaggtggatgattta
ctttccgaagcacgccatagagcggataaaaatgaacgcgttttagtgacgacattaacg
aagaaaatggcggaagatcttaccgactatttagatgaacatggtattcgcgtacgttat
ttgcattctgatattgataccgtcgaacgggtggaaattattcgtgatttgcgcttgggg
gaatttgatgttttagtcggcattaacttattacgggaaggtttagatattccggaagtg
tctttagtggcaattttagatgcggataaagaaggttttttacgttccgagcgttcatta
attcaaacgatcggacgtgctgcgcgaaatttacacggaaaagccattttgtatgcggat
aatataaccaaatcaatggagaaagctattaccgaaaccaatcgtcggcgtgagaaacaa
gcaaaatataatgaagcacagggcattatgccgcaggcattaaataaaaaggtaggcgag
ttgttagatatcggtcagggtgccaatcagaaagccaaagccaataaacaacgtggaaaa
acggtggcagaaccgaccgcactttatacaacgctgaaatcaccgaaagaatatcagcaa
caaattaagaaactggagcagcaaatgtataaatttgcacaggatttggaatttgagaaa
gctgctgcaacgcgcgatcagttacaacaattacgggaaagttttatgttatcaagtgag
taa
DBGET
integrated database retrieval system
