Alicyclobacillus acidoterrestris: K1I37_06765
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Entry
K1I37_06765 CDS
T08106
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aaco
Alicyclobacillus acidoterrestris
Pathway
aaco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1I37_06765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaco03019
]
K1I37_06765
03009 Ribosome biogenesis [BR:
aaco03009
]
K1I37_06765
Enzymes [BR:
aaco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K1I37_06765
Messenger RNA biogenesis [BR:
aaco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K1I37_06765
Ribosome biogenesis [BR:
aaco03009
]
Prokaryotic type
rRNA helicases
K1I37_06765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UNO50172
UniProt:
T0D134
LinkDB
All DBs
Position
1477885..1479333
Genome browser
AA seq
482 aa
AA seq
DB search
MALFSELNLSEPVLKALGNMGFESATDIQSQAIPVAMTGQDVIGQAQTGTGKTVAFSIPV
VEFVDTKSESLQALILTPTRELCIQVAEEIIKVGSVKGVRVLAVYGGQDIGRQIRALRNR
PHVVVATPGRLMDHMNRRTVRLDGVRVAVLDEADEMLDMGFVEDIETILAECPAERQTLL
FSATMKPGVRELAKKFMRDFVVVSAKASEVTVPSIEQVYYEVSEAQKLNVLTRLLDIQSP
ELAIVFGRTKRRVDELTSALQTRGYIADGLHGDLSQKQRDNVMSKFRDGGLDVLVATDVA
ARGLDVSGVTHVYNFDIPQDIDSYVHRIGRTGRAGKSGIAATFVTPREIDHLHHIERVTK
RKITRKPLPTYIEARESKQRVAMEQLLESSQNEDLGAFRHLAEELLENQDSITVVSAAIK
LLTKGTQEVPITLTAERPVRIRGQHKSERGRDHRGRDGSRHGSSRFGKGSGGGHYRGNRA
RG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcattattttcagaactgaatttaagtgaaccagtccttaaagcacttgggaacatg
gggttcgagtcggcaacagacattcaatctcaggcgattcccgtggcgatgactggtcaa
gacgtcattggtcaggcgcagaccggcaccgggaaaacggtggcattctcgattccggta
gtcgagttcgtggatacgaaaagtgaatcgttacaggcgcttattctcacaccgacgcgt
gaattgtgcattcaggtggctgaggaaattattaaagtcggaagcgtcaaaggtgtgcgc
gtgctggcggtctatggtgggcaggacatcgggcggcaaattcgcgcgttgcgcaatcgt
ccgcacgtggtcgttgcgacgccggggcggttgatggaccatatgaaccggcgcactgtg
cgcctggatggcgttcgcgtcgctgtactcgacgaggcagacgagatgctcgatatggga
tttgtcgaagatattgaaacgattctcgccgagtgtccagcagaacggcaaacacttttg
ttttcggctacgatgaaaccaggggttcgcgagctggcgaaaaagttcatgcgcgatttt
gtcgtcgtttcagcaaaggccagcgaggtcacggtcccaagtattgagcaagtgtattat
gaggtgtccgaagcacagaaactgaatgtgttgacgcgcctgcttgacattcaaagccct
gaactcgcgattgtctttggtcggacgaaacgccgggtcgatgaattgacgagcgcgttg
cagacccgtgggtacattgccgatggattgcacggcgacctcagtcagaaacagcgcgat
aacgtcatgagcaagtttcgcgatggcggactggatgtgttggtggcgacggacgttgct
gcacgtgggctcgacgtgtctggtgtcacgcacgtctacaacttcgatatcccacaggac
atcgacagttatgtgcaccgaattggccgtacggggcgcgcgggaaagagcggcattgcg
gccacgtttgtcacaccgcgcgagattgaccacttgcatcacattgaacgcgtgacgaag
cggaaaatcacacgcaagccattgcctacctacattgaggcgagggagagcaagcagcgg
gttgctatggaacaattgctggaatccagccagaatgaagatctcggcgcgttccgtcac
ttggctgaggaactgctggagaatcaggattctatcacggtcgtttctgcagcgattaag
ctgttgaccaagggcacgcaagaagtgccgatcacgttgacggcagagcggcctgttcgc
atccgtggccaacacaagagtgaacgagggcgtgatcaccgtggccgtgacggaagtcgt
catggttcttcccgctttggcaagggcagcggtggcggacactaccgcggcaaccgcgca
cgcggttaa
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