Alicyclobacillus acidoterrestris: K1I37_10025
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Entry
K1I37_10025 CDS
T08106
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aaco
Alicyclobacillus acidoterrestris
Brite
KEGG Orthology (KO) [BR:
aaco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaco03032
]
K1I37_10025 (topA)
03400 DNA repair and recombination proteins [BR:
aaco03400
]
K1I37_10025 (topA)
Enzymes [BR:
aaco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K1I37_10025 (topA)
DNA replication proteins [BR:
aaco03032
]
Prokaryotic type
DNA Topoisomerases
K1I37_10025 (topA)
DNA repair and recombination proteins [BR:
aaco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K1I37_10025 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
UNO47098
UniProt:
T0BQH4
LinkDB
All DBs
Position
2122609..2124714
Genome browser
AA seq
701 aa
AA seq
DB search
MADYLVIVESPAKAKTIGKYLGKRYAVKASMGHVRDLPKSQLGVDVEHDYQPKYITIRGK
GDVIKALRSASKKAKKVYLAADPDREGEAIAWHLQHILDLNPDDSCRVVFHEITKDAIKN
AFKNPRKINMDVVNAQQTRRILDRLVGYRLSPLLWRKVRKGLSAGRVQSVAVRLIVDREN
EIRKFQPEEYWTVDVTSLVDGKKLTSRFYGYDEQKTPLPNEEAVNELLARIGNDALTVRK
VKKSERRRNPAAPFITSSLQQEAARKLGFRAYKTMAVAQQLYEGLDIPGEGTVGLITYMR
TDSTRIAQSAQEEARDYIRREFGAEYVPSQPRQYSKNEDAQDAHEGIRPTSTLRHPDLIK
DHLSKDQYRLYKLIWERFVASQMSSAVLDTTSVDSEVNGAWFRATGSVIKFPGFMAVYIE
GNDDQDDDDKSRLLPPVSEGQVLKTQKVTPEQHFTQPPPRYSESSLVKAMEELGIGRPST
YAPTIDTILKRGYVVLEQKRFVPTELGEIVVELLVENFKQLIDVDFTANLEGELDAVEDG
EADWVKLLDEFYHAFEKDLEHAESSLEHVEIKDEESDVPCDKCGRMMVYKNGRYGKFLAC
PGFPECRNTKPITKEVGVNCPKCDKPLVERRGKRRKVFYGCSGYPECDYVLWQKPTGQLC
PICSHPLVEKQSRGKVTVVCSNEKAHPHAAPLEEESKRKSS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtggccgattatttagtcatcgtcgaatcgcccgcaaaagcgaaaacgattggaaagtat
ttggggaaacgctatgcagtgaaagcctccatgggccacgttcgcgatttgcccaagtcg
cagctcggcgtcgatgtcgagcacgattaccaaccgaaatacatcaccattcgcgggaag
ggcgatgtcatcaaggccctccgcagtgccagcaaaaaggcgaagaaagtgtacctcgca
gccgaccctgaccgcgaaggggaagcgattgcatggcatttacagcacattctcgatttg
aatccagacgattcttgtcgggtcgtctttcacgaaattaccaaagacgcgattaaaaat
gcctttaaaaacccacgcaagatcaacatggatgtcgtcaacgcgcaacagactcgacgc
attctcgaccgcctcgtggggtaccgattgagcccgctgctctggagaaaagtgcgcaaa
ggattgtccgcaggtcgcgtacagtcagtggcagtccgtttgattgtggacagggaaaac
gaaattcgcaaatttcaaccggaggaatactggaccgtcgacgtcacgtcgctggtcgat
ggaaagaaattaacctctcggttctatggatatgatgagcaaaagacgccacttccgaac
gaggaagcggtcaacgagttacttgcgcgaatcggaaatgacgcactgacagtccgcaag
gtcaagaaatcggagcgcaggcgaaatccggctgcaccgttcatcacgagtagtttgcaa
caggaagcggcgcgcaagctcggtttccgggcctacaagacgatggcggtcgcgcaacaa
ctgtacgaagggctcgatataccaggagaaggcaccgtcggtttgatcacctatatgcgt
acagattccacgcggattgcgcagtcggcccaagaagaggcgcgcgactacattcggcgt
gaatttggtgcggaatacgtgccgagtcaaccgcgtcagtacagcaagaacgaagacgcg
caagacgcgcacgaaggcattcgaccaacgtcgacgctgcggcatccagatttgataaaa
gatcatttgtcgaaggaccaatatcgactatacaagttaatttgggagcggttcgtcgcg
agccaaatgtcttctgctgttctcgacaccacgtccgtcgactccgaggtgaatggtgct
tggttccgcgcgacagggtccgtcattaaattccctggctttatggcggtgtacatcgaa
ggcaatgacgaccaggacgacgacgacaagagccgtctgttgccgccagtgtctgagggg
caagtgttgaaaacacaaaaggtcacaccggagcagcatttcacacaaccacctccgcgt
tattctgaatcgagcctcgtgaaggcgatggaggagttggggattggccgcccgagtacc
tacgcaccgacgattgacacgattttgaagcgcggctacgttgttttggagcaaaagcgc
tttgttccgacagagctcggggaaatcgtggtggagttgctggtcgagaactttaaacag
ttaatcgacgtggattttacggcgaacctggaaggtgagctcgacgcagtcgaagacggt
gaggcggactgggtcaaattgttggatgagttctatcacgcgtttgaaaaggacttagaa
cacgcggagagctctctcgaacacgttgaaatcaaagatgaagagtcggatgtgccgtgt
gacaagtgcggccggatgatggtgtacaagaatggccgctatggcaagtttctcgcatgt
ccgggatttcctgagtgccggaacacgaagccgattacgaaagaagtgggcgtcaactgt
ccgaaatgtgataagccgctggttgaacggcgtggtaaacggcgcaaagtgttctatggg
tgcagcggctatcccgagtgtgactatgtgctatggcaaaagcctacgggtcaactgtgc
ccgatttgctcacatccgttagttgaaaagcagtctcgcggtaaagtgacggttgtctgc
agtaatgaaaaagcacacccacacgcagcgcctctggaggaagagagcaagcgaaagtcg
tcttaa
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