Alicyclobacillus acidoterrestris: K1I37_10415
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Entry
K1I37_10415 CDS
T08106
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aaco
Alicyclobacillus acidoterrestris
Pathway
aaco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1I37_10415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaco03019
]
K1I37_10415
03009 Ribosome biogenesis [BR:
aaco03009
]
K1I37_10415
Enzymes [BR:
aaco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K1I37_10415
Messenger RNA biogenesis [BR:
aaco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K1I37_10415
Ribosome biogenesis [BR:
aaco03009
]
Prokaryotic type
rRNA helicases
K1I37_10415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
UNO47167
UniProt:
T0BQA3
LinkDB
All DBs
Position
2197739..2199319
Genome browser
AA seq
526 aa
AA seq
DB search
MSSFEEFGLHRRVVQAIHDMGFEEPSPIQQACIPTVMQGVDVIGQAQTGTGKTAAFGIPL
VDRVTPDHHVQAIVLTPTRELAIQVAGEIRKIAKYKRVRSLPIYGGQSIGHQIRALKQGV
QIVIGTPGRVLDHIRRGTLRLSQVTTVVLDEADEMLDMGFIEDIESILRETPETRQTLLF
SATFPTEVKRLSGRYMRDPQHVTVNRGEVTVPRIDQICYKVLERNKLESLCRIVDSEEVQ
LGIIFCRTKRGVDELVEALMARGYMADGLHGDLSQAQRDRVMRRFRKSEIELLVATDVAA
RGLDVDDVTHVINYDIPQDPESYVHRIGRTGRAGKHGLAITLVTPREFKLLKQIERETKV
SMVLREVPSLEDVAERQAEMWRNRVVDVLNEGGLAHYRAILGNLIDEHDPVDIASALLKI
ASAGEGSRADGDDYDFGDTGARPGMVRFFVNIGRTARMSPADFVRAISEEAGVPGAAVGR
IDIFDRFTFIEVEEESAPFVYEALRQSRINGARVNLEPAKPRGARS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatttgaagagtttggtttgcatcgccgtgttgtgcaggcgattcacgatatg
ggctttgaggagccttcaccgatccaacaagcttgtattcctactgtgatgcagggagta
gacgtgatagggcaagcgcagaccggtaccgggaagacggccgcgtttggtatccctttg
gtcgatcgcgttacacctgaccatcacgtacaggccatcgttctgacgccgacccgggaa
ttggcgattcaagtcgctggggaaatccgcaaaattgccaagtacaaacgcgtacgatcc
ctgccgatttatggtggccaatcgattggccaccaaattcgcgccctgaaacaaggggtc
caaatcgtcattggcacaccgggccgcgttctcgatcacattcgccgcggcacgctccgc
ctgagccaagtgaccaccgtggtgctcgacgaggccgacgagatgctcgatatgggcttt
atcgaggacatcgagagcatcctccgcgaaacgccagagacgcgtcaaaccctgttgttc
tccgcgaccttcccaaccgaggtcaagcgtctgtctggccgttacatgcgcgacccgcag
cacgtcaccgtcaaccgcggggaagtcacggtgccgcgcattgatcagatttgctacaaa
gtgctcgagcgcaataagctcgaaagcctctgccgcatcgtcgacagcgaagaggtgcag
cttggcattatcttctgccggaccaagcgcggcgtcgatgaactcgtcgaggcgctgatg
gcgcgcggttacatggcggatggcctccatggcgatctcagccaggcccaacgcgaccga
gtgatgcgccgcttccgcaagagcgagatcgaactgttggtcgcaacggacgtggcagcc
cgcggcctcgatgtcgacgacgtcacgcacgtcatcaactacgatattccgcaggatcca
gagtcgtatgtccaccgcatcggccgcaccggccgcgcaggcaagcatgggctggcgatc
acgctggtcacaccgcgcgagttcaagctgctgaagcaaattgaacgcgagaccaaggtc
agcatggtcctgcgcgaagttccgtccctagaggacgtagcagagcgccaagcggagatg
tggcgcaatcgcgtcgtcgacgtgctgaacgagggcgggctggcacattaccgggccatc
ctcggcaacctcatcgacgagcacgatcccgtcgacatcgcctccgccttgctgaaaatc
gcgtctgccggtgaaggctcccgcgcagatggcgacgattacgactttggcgacacaggc
gctcgtccgggtatggtgcgcttcttcgtcaacatcggccgcaccgcgcgcatgagccca
gcggacttcgttcgcgccatctccgaagaagccggcgtcccaggtgcagcagttgggcgc
attgacattttcgaccgcttcaccttcatcgaagtggaagaggaaagcgcgccgttcgtc
tacgaagcgcttcgccaaagccgcatcaatggcgcacgcgtcaacctcgagccggccaaa
ccgcgcggcgcaagaagctaa
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