Alicyclobacillus acidoterrestris: K1I37_18825
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Entry
K1I37_18825 CDS
T08106
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aaco
Alicyclobacillus acidoterrestris
Pathway
aaco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1I37_18825 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaco03019
]
K1I37_18825 (recQ)
03400 DNA repair and recombination proteins [BR:
aaco03400
]
K1I37_18825 (recQ)
Enzymes [BR:
aaco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K1I37_18825 (recQ)
Messenger RNA biogenesis [BR:
aaco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K1I37_18825 (recQ)
DNA repair and recombination proteins [BR:
aaco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K1I37_18825 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
UNO48686
UniProt:
T0C6M1
LinkDB
All DBs
Position
complement(3828040..3829845)
Genome browser
AA seq
601 aa
AA seq
DB search
MTQTDTRLYEARELLRKYYGYPDFRPGQIDIVESVLAGRDTVGIMPTGGGKSICYQIPAL
LFEGISIVISPLISLMKDQVDALSNVGIPATYINSSLTADEVYQRMRQAENGEFRLIYVS
PERLEAGAFMAFINRLRPRMVAIDEAHCLSSWGHDFRPSYRAISPLLQQLDERPVIAALT
ATATPEVRKDIVELLHLHQPNVFVTGFDRENLSFSVVTGIDKRDYVLTYLERRPNEAGII
YASTRKEVDSLYEFLEKKRVPVSRYHAGLSDEQRSRNQDQFLYDETRIMVATNAFGMGID
KSNIRFVIHYNLPKNLESYYQEAGRAGRDGDPADCVLLFQPRDVQVQKFLIEQTDTAPDR
RSLDYQKLQAMVDYCHTTHCLRGHILTYFGDEHPPHQCDNCSNCNGDFDKQDVTVAAQQI
FSCVLRMRERFGVKLVAGVLRGSRDKRIQELNLDTLSTYGLMKGKSEKEVVGYIQTLIAD
GYLKLSDGQFPVVQLQSTAVPVLKGQASVVVRVPKRVKAAVQHDNGLFEVLRALRRDLSK
RDGVPPYVIFSDSTLREMAAACPTDKSSMLAIRGVGEMKLNRYGAEFLAACRQFRAEGVA
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgactcagactgacacgcgattatatgaagcaagagaattgctgcgaaaatattatgga
tatcccgatttccgccctggccaaattgacattgtcgagagtgttctcgcaggtagagat
acggtcggcattatgcctacaggtggcggaaaatcaatttgttaccagattccggcgctt
ttattcgaagggatttcgattgtgatttctcctttgatttccctgatgaaagatcaggta
gatgcgctgtcgaacgttggcatcccagcgacctatatcaacagcagcctcaccgctgac
gaggtttaccaacggatgagacaggcggagaacggggagttccgactcatttacgtgtcg
ccagaacgtttggaggccggcgcgttcatggcgtttatcaaccgtttgcgcccgcgcatg
gtggctattgacgaggcgcactgcttatcgagttggggccatgattttcggccgagttat
cgcgcgatttcaccgcttcttcagcaactggacgagcgccctgtcattgcggcgctgacc
gcgacggcgacgcccgaagtgcgcaaggacatcgtcgaattactgcaccttcatcagccc
aatgtgtttgtgaccggctttgatagggaaaatctttcgttttctgtcgtcacagggatc
gataagcgcgattacgttcttacctatctggaacgtcgaccgaatgaagcaggaattatt
tatgcgtcaacgagaaaagaagtcgatagtctctatgagtttttggagaagaaacgggtg
ccggtcagccgttatcacgcggggctaagcgatgaacagcgcagtcggaatcaagaccag
tttctctatgacgaaacgcggattatggtggcgacgaacgcatttggcatgggtattgac
aagtcgaatatccgttttgtgattcactacaacctgccgaaaaaccttgagtcgtattat
caagaagccgggagggccgggcgcgatggggatcccgctgactgcgtgctattgttccaa
ccgcgcgatgtccaggtacaaaagttcctcattgagcagacggacacggcgccggatcga
cggtcactcgattatcagaaactgcaggcgatggtggattactgccacacgacacactgc
ttgcgcggccacatcctgacgtattttggcgacgagcatcccccacatcaatgcgacaac
tgcagcaactgtaacggcgatttcgacaaacaggacgtcactgtcgcagcgcagcagatt
ttttcctgcgtgcttcgcatgcgggagcgctttggcgtcaaactggttgcgggcgtgttg
cggggctcccgcgataagcgcatccaggaactgaacctcgatacgctttccacgtacggg
ctgatgaaggggaaatcggagaaggaggtcgtcggctatattcagacactgattgccgac
ggttatttgaagctttcagacggccaattcccagtcgtgcaacttcagtcgaccgctgta
ccggtattgaaagggcaggcgagtgtcgtcgttcgtgtgccgaagcgcgtcaaggcggct
gtacagcatgataacggtttgtttgaagtgttgcgggcgttgcgcagagacctttcgaag
cgcgatggcgtgccgccgtacgtgattttctccgacagcacgttgcgtgaaatggcggca
gcttgtccaacggacaagtcgtcgatgctggcgattcgcggcgtcggagaaatgaaattg
aaccgctatggcgcggaatttttggccgcttgccggcagtttcgcgccgagggtgtcgca
gactga
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integrated database retrieval system
