KEGG   Alicyclobacillus acidoterrestris: K1I37_19990
Entry
K1I37_19990       CDS       T08106                                 
Symbol
ligD
Name
(GenBank) non-homologous end-joining DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
aaco  Alicyclobacillus acidoterrestris
Pathway
aaco03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:aaco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    K1I37_19990 (ligD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aaco03400]
    K1I37_19990 (ligD)
Enzymes [BR:aaco01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     K1I37_19990 (ligD)
DNA repair and recombination proteins [BR:aaco03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     K1I37_19990 (ligD)
SSDB
Motif
Pfam: LigD_Prim-Pol DUF5659 CPSase_L_D3
Other DBs
NCBI-ProteinID: UNO48871
UniProt: A0A9E6ZK32
LinkDB
Position
4069176..4070081
AA seq 301 aa
MDSIPIAIEDKEIVLTNPHKVLWPEVGVTKLDYIQYLIHISPYLLPYTKNRLLMMWRFPD
GIEASRIVQKSVPQHAPAWIPRAFYKDKFYILLNDLATLVWVANYAAIELHVPFTRHDQP
DTPTDIAFDLDPSVPDAFETVLDVALQLHDVLNSLGLANYAKTSGATGLQIFVPIQPQYT
FEQTRKITKFIAQYLLQKMPKLVTLERSVKNRGDKLYIDYLQLWKMRTLSAVYSVRATAK
ASVSTPVTWSEIARGFLPSDFTVFNVVDRVAQHGDLFAPIAAKDSRESLDAILQFVAQHK
M
NT seq 906 nt   +upstreamnt  +downstreamnt
atggattcaattccaattgcgatcgaagacaaagaaatcgtcctcacgaacccgcataag
gtactctggccagaggtcggtgtgacgaaactcgactacatccagtacctcatccatata
tccccctacctgctgccatacacgaaaaatcggttgctcatgatgtggcgctttccagac
ggaattgaagcttcgcgcatcgttcaaaagtctgtaccgcagcatgcgccagcgtggata
ccacgggcattttacaaagacaagttctatattctgctcaacgacctcgcaaccctcgtc
tgggtggcgaattacgcggctatcgagttacacgtcccattcacacgccacgaccaacca
gacacccccacggatatcgcgtttgacttagacccatccgtgcccgatgcgttcgaaacc
gtgttagacgtcgcgctgcaacttcacgatgtgctcaattcgctaggtctcgccaactac
gccaaaacctcaggcgccactggactacagatatttgtacccatccaaccgcagtacacg
ttcgaacaaactcgcaaaatcaccaaattcatcgcgcagtatctgctgcaaaaaatgccg
aagctagtgaccttagagcgatccgtcaaaaaccgcggcgacaaactgtacatcgactat
ttgcaactttggaagatgcgcaccctatccgctgtctattccgttcgcgcaacggcaaaa
gccagcgtctccacgccagtcacctggtcggaaatcgcccgtggattcctacccagtgac
tttacggtgttcaatgtggtagaccgcgtcgcccaacatggtgacctctttgcgcccatt
gcggccaaggactcccgcgaaagtctggacgccattctccaattcgtggcgcagcataag
atgtag

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