Aggregatibacter actinomycetemcomitans 624: ACT75_01555
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Entry
ACT75_01555 CDS
T04753
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
aact
Aggregatibacter actinomycetemcomitans 624
Brite
KEGG Orthology (KO) [BR:
aact00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aact03019
]
ACT75_01555
Enzymes [BR:
aact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACT75_01555
Messenger RNA biogenesis [BR:
aact03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACT75_01555
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
ResIII
WHD_HA2
T2SSE
nSTAND3
NACHT
AAA_30
AAA_25
DUF6145
nSTAND_NTPase5
SLFN-g3_helicase
DUF1664
TsaE
Motif
Other DBs
NCBI-ProteinID:
AMQ93298
UniProt:
A0A5D0EJQ4
LinkDB
All DBs
Position
complement(343187..347236)
Genome browser
AA seq
1349 aa
AA seq
DB search
MNKRTIKQELNPLQHSLFTQLNDVMLSDKRRLSARIHGIGKIKSADAQQAVATEIEQQIQ
QAKLRVEQRKSAVKNPIAFPESLPVSQRKAEIEKLLSEHQVIVVAGETGSGKTTQLPKMC
LELGLGNFGMIGHTQPRRIAARSVAARIAEELQTELGDLVGYKVRFNDQISDNTQIKLMT
DGILLAEIQTDRFLNQYACLIIDEAHERSLNNDFILGYLKQLLPRRPDLKLIITSATIDV
ERFSKHFNNAPIIEVSGRTYPVEVRYRPIAEEDDQDQLQGILNAVDELQAGGRGDILIFM
NGEREIRDTAEALQKQNLKHTEILPLFARLSAQEQNKIFHPSGLNRIVLATNVAETSLTV
PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDF
NNRPEFTDPEILRTNLASVILQMTALGLDDIEAFPFVDAPDKRHIQDGVKLLEELGALEW
KAIRKSPPSAFGTSPRKQGEGRGILSEEGSSLPPFTGGAARRAEGGNTPTFKEKRVLTNL
GRQLAQLPVDPRLAKMLLSAVNFGSVYEVMIIVSALSIQDPRERPTEKQQAADEKHRRFA
DKKSDFLAFLNLWNYLQEQQKALSKNQFRRQCQKDFLNYLRIREWQDIYQQIRLAVREMG
LPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQEYLGARNAHFAIFPNSVLFKKQPKWVT
AAELVETSKLWGRMVAEIEPEWIEPLAEHLVKKSYSEPRWSKSRGAVITYEKVSLYGVPI
VATRPVNYGAIDPVVSREIFIQSALVEGDWNTKHPFFKQNQQLIREVEELEHKSRRRDIL
VDERTLFEFYDQRIGTDVVSQKHFDTWWKKASKQDPELLNFERSFLINDDAEQVSKLDFP
NFWHQGNLKLKLTYQFEPGTDADGVTVHIPLPLLNQVEMTGFDWQIPGLREELVIALIKS
LPKSYRRNFVPAPNYAQAFLGRAMPLEKPLLDTLIYELRRMTGVTVEAEHWNWAQIPSHL
KMTFRVVDEKGKKIAESMDLDALKFELKDRVQESISAVADDGIEQSGAHIWNFAGLPQFY
EQKKHGFSVKAFPAIVDEKDSVGIKLFETEFEQAVAMQQGLRRLLLLNVPSPIKYLHEKL
PNKSKLGLYFTPFGRVMDLIDDCIACAVDKLIADFGGFVWNEEGFEKLRDFVRENLNEVT
VDIAQKVEQILTLTHQLNQRLKGKMDFTMAFALSDIKSQLSGLVYQGFVQKSGYHRLPDL
LRYLQAIDKRIDKLSQDVNRDRAAMLRVEQVQQAYQQLLAKLPKSKPISDEVAEIRYMIE
ELRVSLFAQQLGTKYQVSEKRVLGIIKQL
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaagaacgataaaacaagaacttaatcctttacaacactcccttttcacacaa
ctgaatgacgtcatgctttcggataaacgccgtttatctgcgcgtattcacggcatcggc
aaaattaaaagcgctgatgcacaacaagctgtcgccacggagatcgaacaacaaattcaa
caggcgaaattacgcgtggaacaacgcaaaagtgcggttaaaaatccgatcgcttttccg
gaaagtctgcctgttagccaacgcaaagcggaaattgaaaaattattgtccgaacaccaa
gtgattgtggtggcaggagagaccggttcgggcaaaaccacccagttgccgaaaatgtgt
ttggaactaggattaggcaacttcggcatgatagggcacacccaaccacgccgcattgcc
gcccgttccgtcgccgcgcgtattgcggaagaattgcaaacggaactgggcgatttggtc
ggttacaaagtgcgttttaacgaccaaatcagcgataacacccaaatcaagttaatgacc
gatgggattttgctggcggaaattcaaacggatcgttttctcaaccaatatgcctgcctg
attatcgacgaagcccacgaacgtagcctgaataacgattttattctcggctatttaaaa
cagcttctgccgcgtcgccctgatcttaaattgattatcacgtccgccaccattgatgtg
gaacgtttttccaaacatttcaacaacgcaccgattattgaagtctccggcagaacctat
cccgtggaagtgcgttatcgtcctatcgcggaagaagacgatcaagaccaactgcaaggc
attttaaatgcggtggacgagctacaagcgggagggcgcggcgatattttgatttttatg
aacggtgaacgggaaatccgcgataccgccgaagccctgcaaaaacaaaatttaaaacac
accgaaatcctaccgctctttgcgcgcctttctgcgcaagagcaaaacaaaattttccac
ccgagcgggttaaatcgcatcgtgcttgccaccaacgtggcggaaacctcgctcactgtg
ccgggtattaaatacgtcatcgaccccggcaccgcgcgtatttcccgttatagctaccgc
accaaagtgcagcgcctgcctatcgaacccatttcacaagcctccgccaatcagcgcaaa
ggacgttgcggacgtgtgagcgaaggcatttgtattcgtctttattcggaagaggatttt
aacaatcgcccggaatttaccgatccggaaatcttacgtactaatttggcatcggtgatt
ttgcaaatgacggcgttgggtctagatgatattgaagccttcccgttcgtggacgcgccg
gataaacggcatattcaggatggcgtgaaattgttggaagagttgggggcgctggaatgg
aaggctattcgtaaatcgcccccctccgccttcggcacctccccccgtaaacagggggag
ggaaggggtattttatcagaagaaggatcttcgctccctccgtttacggggggagctgcc
cgtagggctgagggggggaatactccaactttcaaagaaaaacgtgttctcacaaacctc
ggtcgccaactcgcccagctcccagtcgatccacgcttggcaaaaatgctactaagtgcg
gtcaattttggcagcgtttatgaagtgatgatcatcgtttccgcgttatccattcaggat
ccgcgcgagcgcccgacagaaaaacaacaggcagcggacgaaaaacatcgtcgttttgcc
gataaaaaatcggatttcttggcgttcctgaacctgtggaattatctgcaagaacaacaa
aaagcactgagcaaaaaccaattccgtcgccaatgccagaaggatttcctcaattatctg
cgcattcgcgagtggcaggatatttatcagcaaattcgtctggcagtgcgtgaaatgggg
ttgccgattaattccgaaaaagcggaatatcagcaaattcataccgcacttttaagtggc
ttgttgtcccatatcgggctgaaagaagcggaaaaacaagaatatctcggcgcgcgcaac
gcccatttcgccattttccccaattccgtgcttttcaaaaaacaaccgaaatgggtaacg
gcggcggagctggtggaaacctccaaactttgggggcgtatggtggcggaaatcgagccg
gaatggattgagcctttggctgaacatctggtgaaaaaatcctattccgaaccgcgttgg
tcgaaatcgcgcggggcggtgatcacctatgaaaaagtgagtttgtacggcgtgccgatt
gtggcgacgcgccctgtgaattacggcgctatcgatcctgtggtgagccgtgaaattttt
attcaatcggcattagtggaaggcgattggaatacaaagcacccattcttcaagcaaaat
caacagctgattcgtgaagtggaagaactggaacacaaaagccgtcgtcgtgacattttg
gtggatgagcgcacgttgtttgagttttacgaccaacgcatcggcacagacgtggtgtcg
caaaagcattttgatacctggtggaaaaaagcctcaaaacaggatccggaactgctgaat
ttcgagcgttccttcctgattaatgatgatgcggaacaggtaagcaagctggatttcccg
aatttctggcatcagggtaatttaaaactcaagctcacttatcaatttgaacctggcact
gacgcagacggcgtgaccgtgcatattccgttgccgttgctcaatcaggtggaaatgacg
ggcttcgattggcaaatcccgggtttgcgtgaagaactggtgattgcgctgattaaatcc
ctgccgaaatcctaccgccgcaatttcgtacctgcgccgaattatgcgcaagccttttta
ggtcgcgccatgccgttggaaaaaccgttattggatacgctgatttatgaattacgccgt
atgacgggcgtgacggttgaagcggaacattggaattgggcgcaaatcccaagccattta
aaaatgaccttccgcgtggtggatgaaaaaggcaagaaaattgccgaatcgatggatttg
gacgcgctgaaatttgagctgaaagaccgtgtgcaggaaagcatttctgcggtggcagac
gacggcattgaacaaagcggcgcgcacatttggaatttcgccggcctgccgcaattttac
gaacagaaaaaacacggctttagcgtgaaagcctttccggcgatagtggatgaaaaggac
tccgtcggcattaaactctttgaaacggaatttgagcaagcggtggcaatgcaacaaggt
ctacgccgattattgctgctcaacgtgccgtcaccgattaaatatctgcacgaaaaactg
ccgaataaatccaaactcgggctttatttcacgccgtttggtcgcgtaatggatttgatt
gacgattgcatcgcctgcgccgtggataaacttattgcggatttcggcggttttgtgtgg
aacgaagagggctttgaaaaactgcgcgattttgtgcgggaaaacctcaatgaggtcacc
gtggatattgcacaaaaagtagagcaaatcctcacgctcacccatcaattaaaccaacgg
ctgaaaggcaaaatggatttcaccatggcatttgccttatcggacattaagtctcaatta
agcgggttggtgtatcaaggcttcgtgcaaaagagcggctaccatcgtttgccggatttg
ttgcgttatttacaagccattgataaacgtatcgacaaactttcgcaagatgtgaatcgc
gaccgcgcggcaatgttacgcgtagagcaagttcagcaggcttaccagcaattgctcgcc
aaactcccgaaatccaaaccgatttcagatgaagtggcggaaattcgatatatgatcgaa
gaattgcgcgtgagtttatttgcgcagcagttggggacgaagtatcaggtttcggagaag
agagtgttgggtataattaagcaactctaa
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integrated database retrieval system
