Anas acuta (northern pintail): 137842046
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Entry
137842046 CDS
T11380
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
137842046 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aacu04131
]
137842046 (SCARF1)
Membrane trafficking [BR:
aacu04131
]
Endocytosis
Phagocytosis
Scavenger receptors
137842046 (SCARF1)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137842046
NCBI-ProteinID:
XP_068511759
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Position
19:5662279..5667884
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AA seq
868 aa
AA seq
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MASARPLLCLCLSLYLWLWLWVQGSAQELDPDGRNVCKADSPPAGLACCPGWKQEGRECT
AALCEGEDACGPDEVCVRPGLCRCKPGFFGADCSSRCPAQYWGPDCKQRCPCHPGGTCEA
ASGRCTCHPDRWGELCQFPCQCGPHGRCEPLTGACRCEPGWWSPSCKKQCQCNAANSHCD
PLTGHCHCLPGWWGRRCSFKCACNLSPCTQETGKCECKAGFWGPACQRRCDCLHGSCNPL
SGHCSCVPGYQGRSCREPCPAGKYGSQCVHSCGNCKRSQPCSPVDGFCLACQPGWNGTLC
KERCAPGFHGEGCLQPCPRCRNGDACDAETGSCLHCEPGWMGPSCNSSCPAGTFGDGCQF
LCPECVWGSCDPVSGACLCQAGYWGPSCNDTCPEGYFGVNCSSPCQCSRGPCHPVRGDCA
LSLDPGALAAAILVPLLLLLLCVVCCCCSAGPADARDRAAVPDDDVVARMKHHVQGVLAN
LSAMLPCFSLGGYKLPKVTVSHHDAEIPFNPSFIESPSAAWVSDSSFSSFDTDNEGPEYS
VPPREGVPLLGGAELQDGASPPGEALPDPAAFSSEDVSQPFAIPRTSSIAKAKRPSVSFA
EGTKFGAAETPSPGRKPKTPWGAAKLSPTSGEAGDESPAEQPASDGYESPDPLAKGDESH
RPSPRATPGGRRRVVSGTRHVAQRVEALEAAAKSGSWDTKGKDPNVTTIYMMVGTAGQDP
KTEGGGEGPVQAVLKRLGSLQKGKWAAKEEPKVRRSVEAIQKPPRRALAQRRDSANGCKQ
RESIPGAAGEQRPGKQQHPPGKRQSFPLASASLKGAGAQGGVGDATERGKSLEVTLRLET
KGQAAPEEEPKYETVSCSEDSPAAPAAT
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgcccggccgctgctgtgcctgtgcctgtccctgtacctgtggctgtggctg
tgggtgcagggctctgcccaggagctcgaccccgacggcaggaacgtctgcaaggcggac
agcccccccgcgggcctggcatgctgccccggctggaagcaggaagggcgggagtgcacg
gctgcgctgtgcgaaggcgaggatgcctgcgggccggacgaggtgtgcgtgagaccgggg
ctttgccgctgcaaacccggcttcttcggcgcagactgcagctcccgctgcccggcgcag
tactggggccccgactgcaagcagcggtgcccgtgccaccccggcgggacgtgcgaggcg
gcgagcgggcgctgcacctgccaccccgatcgctggggcgagctgtgccaattcccttgc
caatgcgggccccacggccgctgcgagcccctgaccggtgcctgccgctgcgagccgggc
tggtggtcgcccagctgcaagaagcagtgccagtgcaacgccgccaactcgcactgcgac
cccctgaccgggcactgccactgcctgccaggctggtggggcaggaggtgcagcttcaag
tgcgcctgcaacctctcgccctgcacccaggagacgggcaagtgcgagtgcaaggctggg
ttttgggggccggcgtgccagcggcgctgcgactgcttgcacggctcctgcaaccccctc
agcgggcactgcagctgcgtccccgggtaccagggcaggagctgccgggagccctgcccg
gcggggaaatacgggtcgcagtgtgtgcacagctgcgggaactgcaagcgcagccagccc
tgctcgcccgtggatggcttctgcctggcgtgccagcccggctggaacgggaccctgtgc
aaggagcgctgcgcccccggcttccacggcgagggctgcctccagccgtgcccccgctgc
cggaatggggacgcctgcgatgcggagaccgggtcgtgcctgcactgcgagcccggctgg
atgggacccagctgcaacagctcctgccccgcgggcaccttcggggacgggtgccagttc
ctctgccccgagtgcgtttgggggagctgcgaccccgtgtcgggtgcctgcctctgccag
gccggctactggggacccagctgtaacgacacctgcccggaggggtattttggcgtgaac
tgttcctccccgtgccagtgctcccgagggccctgccaccccgtgcggggtgactgcgcg
ctgagtctggaccccggggctctggccgccgccatcctcgtccctctcctcctgctgctg
ctctgcgttgtctgctgctgctgcagcgccggccccgcagatgccagagacagggcggcc
gtgccggacgacgacgtggtggccaggatgaagcaccacgtgcagggggtgctggcgaac
ctcagcgcgatgctgccctgcttctccctgggcggctacaaacttcccaaagtcacggtt
tcccaccacgacgcagaaatccccttcaaccccagcttcatcgagtcgccctcggccgcc
tgggtttcggacagctccttctcctccttcgacaccgacaacgagggacccgagtactcc
gtccctcccagagaaggtgtcccgctgctggggggggccgagctgcaggacggggcctcc
cccccgggtgaggcactcccagacccggctgccttcagctccgaggacgtctcgcagccc
ttcgccatcccccgcacctccagcatcgccaaggccaagcggccttctgtctccttcgct
gaggggacgaaattcggggcagcggagacccccagccccgggcggaagcccaagaccccg
tggggggcggccaagctgtcccccacatcaggggaagcaggggatgagtcccccgccgag
cagccggccagcgatggctacgagagccccgatcccctcgccaagggggacgaaagccac
cggccatcgcctcgggccaccccggggggccgccggcgggtggtctccggcaccaggcac
gtggcccagagggtggaagccctggaagcggccgccaaaagcggcagctgggacacgaag
gggaaggatcccaacgtcaccaccatctacatgatggtggggacggccgggcaggacccc
aaaaccgagggaggtggcgagggaccggtccaggccgtgctgaagcggctggggagcctg
cagaaaggcaagtgggccgccaaggaggagcccaaggtgcggaggagcgtcgaggccatc
caaaaacctccccgccgggccctggcgcagcgcagggactcggcgaacggctgcaagcag
agggagagcatcccgggggctgcaggtgagcagcgccccggcaaacagcagcaccccccc
gggaagagacagtccttcccgctggcatcggcctcgctgaaaggcgccggggctcagggt
ggggttggcgatgccacggagaggggaaaaagcctggaggtgaccctaaggctggaaacg
aagggccaggctgcccccgaggaagagcccaaatacgagaccgtgagctgcagcgaggat
tcaccggctgcccccgcggccacctga
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