Anas acuta (northern pintail): 137842049
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Entry
137842049 CDS
T11380
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu03030
DNA replication
aacu03420
Nucleotide excision repair
aacu03430
Mismatch repair
aacu03440
Homologous recombination
aacu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137842049 (RPA1)
03420 Nucleotide excision repair
137842049 (RPA1)
03430 Mismatch repair
137842049 (RPA1)
03440 Homologous recombination
137842049 (RPA1)
03460 Fanconi anemia pathway
137842049 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aacu03000
]
137842049 (RPA1)
03032 DNA replication proteins [BR:
aacu03032
]
137842049 (RPA1)
03400 DNA repair and recombination proteins [BR:
aacu03400
]
137842049 (RPA1)
Transcription factors [BR:
aacu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
137842049 (RPA1)
DNA replication proteins [BR:
aacu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
137842049 (RPA1)
DNA repair and recombination proteins [BR:
aacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
137842049 (RPA1)
MMR (mismatch excision repair)
137842049 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
137842049 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137842049
NCBI-ProteinID:
XP_068511763
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Position
19:complement(5548902..5571667)
Genome browser
AA seq
640 aa
AA seq
DB search
MTRRKRERGSERREDSAVAERGGSGGTMSVRLSEGAIAAIMQGENITKPVLQVINTRAIA
TGNGPPRYRVLMSDGVNTLSSFMLATQLNSLVEEERLSAQCICQVNRFIVNSLKDGRRVV
ILMDLDVLKTADMVGGNIGNPVPYNEGQGQQRSSAPAANAAANKPQQQNGNVSVAGPPAP
KYHAPSNQFSKASAPSAMKTPGGSQAKVVPIASLNPYQSKWTICARVTQKGQIRTWSNSR
GEGKLFSIELVDESGEIRATAFNDQADKFFPLIELNKVYYFTKGNLKTANKQYTAVKNDY
EITFTNETSVVLCDDAQHLPSVRFEFVSISELENTPKDSIVDVIGICKSYEDVTKITVKA
SNREVSKRNVHLMDTSGKLVTATLWGNEADTFDGSRQPVVAIKGARVSDFGGRSLSVLSS
STVVVNPDTPEAFKLRGWFDSEGQLLECSSISDVRGSAPGVNTNWKTLYEVKAENLGQGD
KADYFSCVGTVVHLRKENCMYQACPSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLL
VTIADCLEYQWVTCFQDTAEFILGQSAAFLGELKEKNEQAFEEVFQNANFNTYEFRIRVK
LETYNDESRIKATAMDVKPVNYREYSKRLIANIRRNAQLG
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgccggaagcgggagcgcggctcggagcggcgggaggattcggcggtggcggag
cgcggcgggagcggcggcaccatgagcgtgcgcctcagcgagggcgccatcgcggccatc
atgcagggggagaacatcacgaagcccgtgctgcaagtcattaatacacgggctattgct
acaggaaatgggcctcctcgttaccgagtgctgatgagcgatggggttaacacgctgtcc
tccttcatgttggcaacgcagctgaactctctcgtggaagaggaacgcttatcagcccag
tgtatttgccaggttaacagattcattgtcaacagcttgaaagatggaaggagagtggtt
atcttgatggacttagatgttctaaaaactgctgatatggttggtggtaatattggcaat
ccagtgccgtacaatgaagggcaggggcagcagcgttcttcagctccagcagcaaatgca
gcagccaacaaaccacagcaacaaaatggcaatgtgtcagtagcaggtcctcctgctcca
aagtaccacgctccctcaaaccagttcagtaaagcgagtgctcccagcgcaatgaagaca
ccagggggatctcaggctaaagtagtgccgattgccagcttgaatccataccaatctaag
tggaccatttgcgctcgtgttacccaaaaaggccagatccgcacatggagcaactcccgc
ggggaaggaaagctcttttctatagagcttgttgatgaaagtggtgagattagagctact
gcgttcaatgatcaagcagacaagttctttcctctcattgaactgaacaaggtatattat
tttaccaaaggcaatttgaagactgctaacaagcaatatacagctgttaagaatgactac
gagattacattcactaatgagacttcagttgtgctctgtgatgatgcccagcatcttcca
tctgttcggtttgagtttgtatccatctcggagttggagaacacacccaaagactcaatt
gtcgatgtaattggaatctgtaagagctatgaagatgtcactaaaattacagtgaaagct
agcaatagggaagtatcaaagaggaatgtgcatctgatggatacatcagggaaactggtg
acagctacgctatggggaaatgaggctgacacatttgatggttctagacaacctgtggta
gccatcaaaggagcccgagtctctgattttggtggtagaagcctctctgtcctgtcgtcg
agtacagttgttgtcaaccctgataccccagaggcttttaagcttcgaggatggtttgac
tccgaggggcagcttctggaatgctcctcgatctctgatgtaagaggctcagcacctggg
gtgaacaccaactggaaaactttgtatgaagtcaaagctgagaacttgggacaaggagat
aaggcggattattttagctgtgtgggcacagtagtacatctgcgcaaagagaactgcatg
taccaggcctgtccctctcaggattgcaataagaaagtgatagaccaacagaatggactg
tatcgttgtgaaaagtgtgatcgtgaattccccaatttcaagtaccgcatgatgcttctg
gtgaccattgcagactgtctagagtatcagtgggtgacttgcttccaagacacagcagaa
ttcattcttgggcaaagtgctgctttcctgggagaactgaaggaaaagaatgagcaggca
tttgaagaagtcttccaaaatgccaacttcaacacatatgagttcaggatcagagtaaaa
ctggagacttacaatgacgaatcccgtattaaggctacagcaatggatgtcaaacccgta
aactacagagaatacagcaagaggttgatcgcaaacatcaggagaaatgctcagctaggg
tga
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