Anas acuta (northern pintail): 137842527
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Entry
137842527 CDS
T11380
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
aacu
Anas acuta (northern pintail)
Pathway
aacu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
137842527 (NOTCH1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
137842527
NCBI-ProteinID:
XP_068512767
LinkDB
All DBs
Position
20:8861087..8899929
Genome browser
AA seq
2551 aa
AA seq
DB search
MKRLLATGLLLALLPAPTRGVRCTQPAESCLNGGKCETLLNGTEVCQCRSTHVGERCQLP
NPCQSSPCKNSGTCTPVVRGGTADYTCACRLGYTDELCLTPRENACLNNPCRNGGTCELL
TLSEYKCRCPPGWSGKSCQQADPCASNPCANGGQCVPFEAHYVCRCTAGFHGANCKQDVN
ECNISPPVCKNGGSCTNEVGTYQCSCKPAYTGQNCEHLYVPCNPSPCQNGGTCRQTGDTT
YDCTCLPGFAGQNCEENIDDCPGNNCRNGGTCVDGVNTYNCQCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFQGATCHDRVASFYCE
CPHGRTGLLCHLDDACISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSLGA
NPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGNCLDKINEFHCECPTGFNGHLCQFDIDECASTPCKNG
AKCVDGPNTYSCECTEGFSGAHCEIDIDECDPDPCHYGTCKDSIASFTCLCQPGYTGHRC
DININECQSQPCKNGGTCQDRNNAYNCLCLKGTTGPNCEINLDDCASNPCDYGKCIDKIN
GYECTCEPGYTGRMCNINIDECASNPCHNGGTCKDGINGFTCLCPEGFHDPKCLSEVNEC
NSNPCIHGRCHDGLNGYRCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTSGYICTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYTCNCLLPYTGATCEDVLAPCAGGPCKN
GGECRESEDYESFSCSCPPGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRCLCRAGFA
GRNCDTDIDDCQPNPCHNGGSCSDSVGTFFCECLAGFRGPKCEEDINECASNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCLCPAGFTGSYCEH
NINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNL
YRCECNSGWTGLYCDVPSVSCEVAAKQQGIDVAHLCRNSGLCVDTGNTHFCRCQAGYTGS
YCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCID
LINTYKCSCPRGTQGVHCEINVDDCSPFFDPVTLGPKCFNNGKCTDRVGGYSCICPPGFV
GERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRPGYAGRRCDTVVDGCKGKPCRNGG
TCAVASNTGRGFICKCPPGFVGATCENDSRTCGNLHCLNGGTCISIHKSSKCMCAPAFTG
PECQYPASSPCTSNPCYNGGTCEFLSDAPPYYHCNCPANFNGLNCHILDFDFQGGFGQDI
IPPKIEEKCEIAVCAGYAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYF
NDGKCDSQCNNAGCLYDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFECEWDGLD
CANNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNSKGEYMIFPYY
GNEEELKKHYIKRSTEDWSDMSSAVINKVKTSLYSRAGRRQKRELDQMDIRGSIVYLEID
NRQCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPTRNSQLYPMYVVV
AVLVLLAFIGVGVLVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNAS
DGTLMDDNQNEWGDEETLDTKKFRFEEQAMLPDSDDQTDHRQWTQQHLDAADLRISSMAP
TPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDFIYQGASL
HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINCHADVNAVDDLGKSALHWAAAVNN
IEAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI
AQERMHHDIVRLLDEYNLVRSPPLHNGPLGAPTLSPPLCSPNSYIGNLKPAVQGKKARKP
STKGLSCNGKDAKDLKARRKKSQDGKGCLLDNSSVLSPVDSLESPHGYLSDVASPPLMTS
PFQQSPSMPLNHLPGMPDAHMSINHLNMAGKQDMAMGNSSRMAFDSVPPRLSHLPVSSPS
TAMSNAPMNFSVGGAAGLNGQCDWLSRLQTGMVQNQYNPLRGNMQPGTHQQTQNLQHGMM
TSLHNGLPTTSLSQMMSYQAMPNTRLASQPHLMQSQQLQQLQQQQLQQPGMQPQQPPQQP
AQPPPPPQQQPQQHHGAGSTASGHMGQNFLGTELSQPELQPVSGSTMAVHTILPQDSQLL
PTSLPSSLAQPMTTTQFLTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQWSSSS
PHSNVSDWSEGISSPPTSMQSQLGHIPEAFK
NT seq
7656 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggctcctggccaccgggctcctgctggccctgctgcccgccccgacgcgaggt
gtgcgatgcacgcagccggccgagtcctgcctcaacgggggcaagtgcgagactttgctc
aatgggacggaggtgtgccagtgcaggagcacccacgtgggcgagcggtgccagctgccc
aacccctgccagagctccccctgcaaaaactccggcacctgcaccccggtggtgcgcggc
ggcaccgcggactacacctgcgcctgccgcctgggctacaccgacgagctctgcctcacg
ccccgcgagaacgcctgcctcaacaacccctgccgcaacgggggaacctgcgagctgctg
accctcagcgagtacaagtgccgctgcccaccggggtggtcaggtaaaagctgccagcag
gccgacccctgcgcctccaacccctgtgccaacgggggccagtgcgtccccttcgaagcc
cactacgtctgccgctgcacggccggcttccacggcgccaactgcaagcaggacgtgaac
gagtgcaacatctcgccccccgtctgcaagaacggcggcagctgcaccaacgaggtgggc
acctaccagtgctcctgcaagcccgcctacaccggccagaactgcgagcacctctacgtg
ccctgcaacccctcgccctgccagaacggggggacgtgccgccagaccggggacaccacc
tacgactgcacgtgtctgccaggattcgcgggtcagaactgcgaggagaacatcgacgac
tgtccggggaacaactgcaggaatgggggcacctgcgtggacggcgtcaacacctacaac
tgccagtgcccacccgagtggacaggccagtactgcaccgaggacgtggacgagtgccag
ctgatgcccaacgcctgccagaacgggggcacctgccacaacaaccacggcggctacaac
tgcgtctgcgtcaacggctggacgggcgaggactgcagcgagaacatcgacgactgcgcc
atggccgcctgcttccagggggccacctgccacgaccgggtggcctccttctactgcgag
tgtccccacggccgcacaggtttgctgtgccacctggatgacgcctgcatcagcaacccc
tgcaacgagggctccaactgcgacaccaaccccgtcaacggcaaagccatctgcacgtgt
ccctcggggtacatggggccagcctgcaaccaggacgtggacgagtgctcgctgggagcc
aacccatgcgagcacgcggggaaatgcatcaacacccagggctccttccagtgccagtgt
ctgcagggctactcaggccctcgctgcgaaatagatgtcaacgagtgcctctccaacccc
tgccagaacgatgccacctgcctggatcagattggggagtttcagtgcatctgcatgccc
gggtacgagggcgtctactgcgagatcaacacggacgagtgcgccagcagcccctgcctg
cacaacggcaactgcctggataagatcaacgagttccactgcgagtgccccaccggcttc
aacgggcacctgtgccagttcgacatcgacgagtgcgccagcaccccctgcaagaacggg
gccaagtgcgtggacggccccaacacctacagctgcgagtgcaccgaaggtttctcgggc
gctcactgcgagatcgacatcgacgagtgcgaccccgacccgtgccactacgggacctgc
aaggacagcatcgcctccttcacctgcctctgccagcccggctacacgggccaccgctgc
gacatcaacatcaacgagtgccagagccagccctgcaaaaacggggggacctgccaggac
aggaacaacgcctacaactgcctgtgcctcaaggggaccacagggcccaactgcgagatc
aacttggatgactgcgccagcaacccctgcgactacggcaagtgcatcgacaagatcaat
ggctacgagtgcacctgcgagccgggctacacagggcgcatgtgcaacatcaacatcgac
gagtgcgccagcaacccctgccacaacgggggcacctgcaaggacggcatcaacggcttc
acttgcctctgccccgagggtttccacgaccccaagtgcctgtctgaagtgaacgagtgc
aacagcaacccctgcatccacgggcgatgccacgatgggctgaacggttaccggtgcgat
tgtgacccgggctggagcgggacaaactgcgacattaacaacaacgagtgcgaatccaac
ccctgcatgaacggtggcacctgcaaggacatgaccagcggctacatctgcacctgcagg
gaagggttcagcggacccaactgccagaccaatatcaacgagtgcgcttccaacccctgc
ctgaatcagggcacctgcatcgacgacgtggccggctacacctgcaactgcctcctgccc
tacacaggagccacctgcgaggacgtgctggccccctgcgccggcggcccctgcaagaac
ggcggcgagtgccgggagtcggaggactacgagagcttctcctgcagctgcccgcccggc
tggcaaggtcagacgtgcgagatcgacatcaatgagtgcgtgaagagcccctgccgcaac
ggggccacgtgccagaacaccaacggcagctaccgctgcctctgcagggcgggcttcgcc
ggccgcaactgcgacaccgacatcgacgactgccagcccaatccgtgccacaacggtggc
tcctgctcagacagcgtgggcaccttcttctgcgagtgcctggccggcttccgcggcccc
aagtgcgaggaggacatcaacgagtgcgccagcaacccctgcaagaacggtgccaactgc
accgactgcgtcaacagctacacctgcacctgcccctccggcttcagcggcatccactgc
gagaacaacactcccgactgcaccgagagctcctgcttcaacggtgggacctgcgtggat
ggcatcaacacgttcacctgcctctgcccggccggcttcacgggcagctactgcgagcac
aacatcaacgagtgcgactccaagccctgcctcaacgggggcacctgccaggacagctac
gggacgtacaagtgcacgtgtccccagggatacaccgggctcaactgccagaacctggtg
cgctggtgcgactcctcgccctgcaagaacggggggaagtgctggcagaccaacaacctg
taccgctgcgagtgcaacagcggctggaccgggctctactgcgatgtccccagcgtctcc
tgtgaggtggctgcaaagcagcaaggtatcgacgtcgcacacctctgcaggaactcgggg
ctctgcgtggacaccggcaacactcacttctgccgctgccaggccggctacaccggcagc
tactgcgaggagcaggtggacgagtgctccccaaacccctgccagaacggagccacctgc
acggattacctgggaggttactcctgtgagtgcgtggctggttatcatggagttaactgc
tcggaggagatcaatgagtgcttgtcccacccgtgccagaacggaggaacctgcatcgat
ctcatcaatacctacaaatgctcctgccccagaggaacccaaggggtgcactgtgagatc
aatgtggatgactgcagccctttctttgatcctgtcaccctggggcccaagtgctttaac
aatggcaagtgcacggatcgggtaggtggctacagctgcatctgcccccctggctttgta
ggggagcgctgcgagggagacgtcaacgagtgcctgtccaacccctgcgacgcgcgcggc
acccagaactgcgtgcagcgggtcaatgactacaaatgcgagtgccggcctggctacgca
gggcgtcgctgcgacaccgtggtggacggctgcaaggggaagccctgcaggaacgggggg
acgtgcgccgtggccagcaacaccggccgtggcttcatctgcaagtgccccccgggcttc
gtgggtgccacctgcgagaacgactcccgtacctgcgggaatttgcactgcctgaacggc
ggcacctgcatctccatccacaagagctccaagtgcatgtgcgcgccggccttcacgggg
cccgagtgccagtacccggccagcagcccctgcacctccaacccctgctacaacgggggc
acctgcgagttcctcagcgacgctcccccctattaccactgcaactgccccgccaacttc
aacggcctcaactgccacatcctcgacttcgatttccaaggtggctttgggcaggacatc
atcccacccaaaatcgaggagaagtgcgagatcgccgtttgcgccggctacgccggcaac
aagatctgcgatggcaagtgcaacaaccacgcctgcggctgggacgggggcgactgctcc
ctcaacttcaacgacccctggaagaactgctcgcagtcgctgcagtgctggaagtacttc
aacgacggcaagtgcgactcccagtgcaataacgcgggctgcctgtacgatgggttcgac
tgccagaagtacgaagggcagtgcaaccccctgtatgaccagtactgcaaggaccacttc
tcagacggtcactgcgaccagggctgcaataattttgagtgcgaatgggacggtctggac
tgtgcaaacaatatgccggagaagcttgcggacggcaccctggtggtggtggtgctgatc
acccccgagaacctaaagaacaactccttcaatttcctgcgggagctgagccgcgtgctg
cacaccaacgtggtcttcaagaagaactccaagggggagtacatgatcttcccctactac
ggcaacgaggaggagctgaagaagcattacatcaagaggtcaacagaggactggtccgat
atgtccagtgctgtcatcaacaaagtaaagaccagcctctactcccgggctggcaggagg
cagaagagagagctcgaccagatggacatcagaggatccatcgtctacttggaaattgat
aaccgtcagtgcatccagtcgtcttcccagtgcttccagagtgcaaccgacgtggcggcg
ttcctgggtgccttggcctcccttggcaacctgaacataccctacaaaatagaagccgtt
aaaagtgaaacggccgagcccacgaggaactcccagctctatcctatgtacgtggtggta
gctgtgctggtcttgcttgctttcattggagtgggagtactggtatctcgtaagcggcgc
agggagcatgggcagctttggttcccagagggcttcaaagtgacagagtcgagcaagaag
aagcgacgagagccgcttggggaggattctgttggactgaaacccctcaaaaatgcttca
gatggcacactgatggatgacaaccaaaatgagtggggtgatgaggagaccttggacacc
aagaagttcaggttcgaggagcaggcgatgctgcctgattcagacgatcagacggaccac
aggcagtggacccaacagcacctggacgccgccgacctccgcatatcctccatggcacct
actccaccgcagggtgaaatcgatgcggactgcatggacgtcaacgtgagaggtcccgat
ggcttcacccccctcatgatcgcctcgtgcagcggaggcgggctggagactggcaacagc
gaagaggaggacgatgcccccgccgtcatctccgacttcatttaccaaggtgccagcctg
cacaatcagaccgaccgcacgggcgagaccgccctgcacctggccgcccgctactcccgc
tccgacgctgccaagcgcctgctggaagccagcgctgatgcaaacatccaggacaacatg
ggcaggacgcctctccatgcagccgtctccgccgatgcccaaggagtcttccagatcctc
attaggaacagggcaaccgatctggacgcccgcatgcacgatgggaccacccctctgatc
ctggctgctcgcctggctgtggagggcatgctggaggatctcatcaactgccacgcagac
gtcaacgccgtggatgatctaggcaaatcagctctgcactgggcagcggccgtgaataac
attgaggctgcagtcgtccttctgaagaacggagccaacaaggacatgcagaacaataag
gaggagaccccgctgttcctcgcggccagagaggggagctacgaaacggccaaagtcctc
ctggaccattttgcgaaccgcgacatcacggaccacatggaccggctgccgcgggacatc
gcgcaggagcgcatgcaccacgacatcgtcaggctgctggatgagtacaacctggtgcgg
agcccgccgctgcacaacggccccctgggggcacccaccctgtccccgccgctctgctcc
cccaacagctacatcggcaacctgaaacccgccgtccagggcaagaaggccaggaagccg
agtaccaagggcctgagctgcaacggcaaggatgccaaagacctgaaagcccggaggaaa
aaatcgcaagatggaaaaggctgcctgctcgacaactccagcgtgctgtcccccgtggac
tccctggagtcaccccacgggtacctgtcagatgtcgcctctcctccgctgatgacctct
ccgtttcagcagtccccctccatgcctctgaaccacctgccaggcatgcccgacgcccac
atgagcatcaaccacctcaacatggcggggaagcaggatatggccatgggaaactccagc
aggatggccttcgactcagtgccgccgcgcctctcgcacctccccgtctccagccccagc
acagccatgagcaacgccccgatgaatttctccgtcggcggagccgccggcctgaacggg
cagtgcgactggctgagcaggctgcagacgggcatggtgcagaaccagtacaaccccctg
cggggcaacatgcagccggggacgcaccagcagacgcagaacctgcagcacggcatgatg
acctccctgcacaacggcttgcccaccaccagcttgtcgcagatgatgagctaccaggcc
atgcccaacacccggctggcctcccagcctcacctgatgcagagccagcagctgcagcag
ctccagcagcagcagctgcagcagcccggcatgcagccgcagcagcccccgcagcaaccc
gcgcagccgccgccgccgccgcagcagcagccgcagcagcatcacggcgccggctccacc
gccagcggccacatgggccaaaatttcctcggtaccgagctgagccagcccgagctgcag
ccggtgagcggcagcaccatggcggtgcacaccatcctgccgcaggattcccagctgctg
cccacctccctgccgtcctccctcgcgcagcccatgaccaccacgcagttcctcacgccg
ccctcccagcacagttattcctcccccttggacaacacccccagccaccagctccaggtg
cccgaccaccccttcctaacgccctctccggagtctccggaccagtggtcgagctcctct
cctcactccaacgtgtccgactggtccgagggcatctccagccccccgaccagcatgcag
tcgcagctgggacacatccccgaagccttcaagtga
DBGET
integrated database retrieval system
