Anas acuta (northern pintail): 137842695
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Entry
137842695 CDS
T11380
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
aacu Anas acuta (northern pintail)
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aacu03000
]
137842695 (RC3H2)
04121 Ubiquitin system [BR:
aacu04121
]
137842695 (RC3H2)
Transcription factors [BR:
aacu03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
137842695 (RC3H2)
Ubiquitin system [BR:
aacu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137842695 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
137842695
NCBI-ProteinID:
XP_068513116
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All DBs
Position
20:complement(10055560..10085314)
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AA seq
1191 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEATGKIVPSSNGIANLESGVPQLIPRCADTSLRALENTKKGGKTGANGQNVSGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSQFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDMIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSALHMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSSYGSDST
SSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGETDYTEDCADAKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSQDDQLLNGTTVENGHPLKQHQKESMEQKRQSLGEDLVILEEQKTILPVTSCFS
QPITTSVSNASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacactgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgccatcaatacagac
atcgatgtgcttcctgtaaactttgcactcctccagttagttggagcccaggtacctgat
catcagacagtaaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgctagc
ttgaatcagagtgcactgagccgtccaatgcaaaggaagcttgtgacactagtgaattgt
caactggtagaggaagagggtcgggttcgagctatgagggcagctcgatcactgggagag
agaactgttacagaactgatcttgcagcaccaaaatcctcagcagctttctgccaacctt
tgggctgctgtcagggcacggggatgtcagtttctagggccagctatgcaagaagaagca
ctgaaacttgtattactggcattggaagatggctctgcgctctcaagaaaagttctggta
ctttttgttgtgcaaaggctagaaccaagatttcctcaggcctctaaaacaagcattggt
catgtcgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcagcttaaagaagagtttcggagttacgaggctttgcggagagagcat
gatgcccaaattgttcacattgccatggaagcaggacttcgaatatcaccagaacaatgg
tcttcccttctttatggtgacttggcacataaatcacacatgcaatccattatcgacaag
ctccaatctccagagtcttttgcgaagagtgtacaagaattgacaattgtcttgcagcgc
acgggtgatcctgcaaacttaaacaggctcaggcctcatttggagctcctggcaaatatt
gatccaaatccagatgcagcatctccaacatgggagcagctggaaaatgcaatggtggct
gtaaagactgtggtacatggattggtggatttcattcagaattacagtagaaaaggacat
gaaactccacagccacaaccaaatagcaaatacaaaacaagtatgtgccgagaccttcga
cagcaagggggatgtccaagaggaaccaactgtacttttgctcattctcaggaagagctt
gaaaaataccgcctgaggaacaaaaaaatcagtgcaacagtgagaacgttcccccttcta
aataaagttggtgtaaatagcactgtctcgaccactacgggaaatgtaatttctgtcata
ggaagccctgaagcaacagggaagatagtgccgagtagtaatggaatagctaatctagaa
agtggtgttccccagttgatccctcgctgtgcagacacctctttgagagctttggagaac
accaagaagggagggaagactggagccaatggccagaacgtttcaggatcccctacagaa
tcactacctgaaaacaaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcccaacattggaacagaagtgaactctgtgcctccaaaatccagc
cagtttgttcccagagtacctgtctaccctccacattctgataatgttcaatatttccaa
gatcccaggactcagttgtcgtatgaagttccacagtacccccagacaggctattatcca
ccacctccaacagtaccagctggcgtggctccctgtgttcctcgctttgtgaggtccaat
aatgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgctccagtttatgacagcaggcgcatctgg
cgcccacagatgtatccacgagatgatatgattaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagacatcattacgtgagagatacaactctttggatggg
tattactctgtggcttgtcaacccccaaatgaacagaggactgtgcctttaccaagggag
ccttgtggtcacttgaagactggttacgatgagcagttaagacggaagccagagcaatgg
gcacaataccacacgcagaaaactcctcttgtgtcgtcagcccttcatatggcaacacca
tctccaacaccaccttctcctctcttcagtgtagatttcagcacagagttctcagagagt
gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccgtgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattcaaatgccgtgttaatggatttggacagcggggatgttaaaaggagagtgcat
ttatttgaaactcagagaagggcaaaggaagaagatcctataatcccgtttagcgatgga
ccgatcatttccaagtggggtgcaatctccaggtcatcccgtacaggttaccacacaaca
gatcctattcaggccactgcttcccaaggaagtgcaactaagcccatcagtgtatcagat
tatgtcccttatgtcaatgctgttgactcgagatggagttcgtatggctcagattccact
tcatcagcacgttacgcagaacgggacagattcatagttacagatttgtctggtcacaga
aagcattccagcactggagatttattaagtattgaattacagcaggccaaaagtaactcg
ttattacttcagagagaggcgaacgcactagccatgcaacagaagtggaattctctagat
gaaggcagtcgccttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
actgattatactgaagactgtgcagatgcaaagccagatcgagacattgaattggagctg
tcagccctagatacagatgaacccgatgggcagggtgaacaaatagaagagattctggat
atacagctaggtattagttctcaagatgatcagctgctcaatggaacaactgtagagaac
gggcatccactaaagcagcaccagaaagaatctatggaacagaagagacaaagtttaggt
gaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaacttcttgcttcagt
cagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagcacatcagtcagt
gttggcagcctcattttgaaaactgctcacattatgtctgaggataaaaatgacttttta
aagcctgttgcaaatggcaggatggttaacagctga
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integrated database retrieval system
