Anas acuta (northern pintail): 137842945
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Entry
137842945 CDS
T11380
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137842945 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aacu03000
]
137842945 (ARID1A)
03021 Transcription machinery [BR:
aacu03021
]
137842945 (ARID1A)
03036 Chromosome and associated proteins [BR:
aacu03036
]
137842945 (ARID1A)
Transcription factors [BR:
aacu03000
]
Eukaryotic type
Helix-turn-helix
ARID
137842945 (ARID1A)
Transcription machinery [BR:
aacu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137842945 (ARID1A)
Chromosome and associated proteins [BR:
aacu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137842945 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137842945
NCBI-ProteinID:
XP_068513757
LinkDB
All DBs
Position
21:complement(4679373..4740311)
Genome browser
AA seq
2296 aa
AA seq
DB search
MAAQVAPAAASSLGAPAPAELKKAEAQQQQQQRDCPPEEAGGEAAAERGGGGGEKQAESE
GPPGKELQDGAESNGGGAGAEADLKSSNGNPGPRPAAAAATLNNNLPEPPGGGGGGGSSD
GVGAPQQQQQQPPQQQQQQPPPSHPAALPPPAYGFGQPYGRGAQAAAAAAAAAAAAAAAF
HQHGGQQSPGMAALQSGGLEQPYPGPTGAPAGPPPPQNSHGGAEHGFANHQYNSYYAAGR
SAASYPPPPQAYALSSPRGSAQSSAGAKSPAAAAFQQQRFGVMGPSAAGGGAGGGGATPQ
PTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAAAAAAAAAAAKGPAAADMVSQYG
GGNSQGWAAAGGAPPRSHHAPMSPGSSSGSGQSLGRSQQPSSPMDQMGKMRPQPYGGNNP
YTQQQGPQAGPQQGHGYPGQPYGPQTPQRYPMGMQSRTQSTMSSISYAQQIPPYGQQGPS
AYGQQSQTPYYNQQSPHPQQQQPPYSQQPPSQTPHSQPSYQQQQQPQSQPPQLQTSQPAY
SQQQSQPPHQQSPTPYPQQQSTAQQHQQSQPPYSQQQSQSPYQQQQQTQQTASSALSQQS
SSYPQSQPQQQQSAYSQQRFPPPQELSQESFGSQASSAPSMASSKGQEDMNLNLQSRPSS
LPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPS
PVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYLQRNPQ
MPQYSSPQPGSALSPRQSSGGQMHAGMGPYQQNSMGSYGPQGGQYGPQGGYPRQPNYNAM
SNANYPSPGMGGSMNPMGAGSQMHGQTGVPPYTGLPPGRMSHATMGNRPYGPNMANMPPQ
VGTGMCPPPGGMNRKAQEAAAAAMHAAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSM
AGMINPQGPPYPMGGNMANNSAGMAASPEMMGLADVKLTPATKMNNKADGTPKAESKSKK
SSSSTTTNEKITKLYELGGEPERKIWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYIS
VKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDI
FAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLP
GIRSNSVGLQDAFTDGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYSSMRK
APGSDPFMSSGQGPNSGMGDPYNRAAGPGMGNMAMGQRPHYPYGGPYDRVRTEPGMGPEG
NLAAGTPQPNIMPSTPESGMYSPSRYPQQQQQQQRHDSYGNQFSSQGTSSGSPFPSQQTT
MYQQQQQNYKRPMDGSYGPPAKRHEGEMYNVPYSAGQGQTQQQLPPAQTQQPSQQQTAQP
SPQQDLYNQYGSTYPAADRRSAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQ
SAPEGPQQGAMWQGRNEIGYSYPNRQSTGSAPQGPAYHGVTRTDEILHSEQRVNHEGPWS
SHGNRQPPYGPSAPVPPMTRPPQSNYQTPPSMQNHIPQVSSPAPLPRPLENRTSPSKSPF
LHSGMKMQKAGPPVPASHITPAAVQPPMIRRDITFPPGSVEATQPVLKQRRRLTAKDIGT
PEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIE
IFGILKEYEVGDPGQRTLLDPERFCRSSSSSHEEGEEDDEPRSLNCEEEEEDEEEEEAAF
SGKDKVPLESSEEKLVSKFDKLPVKVVQKNDPFVVDYSDKLGRVQEFDSGLLHWRIGGGD
TTEHIQTHFESKMELPLTHKRASCNSVLRKRSAAESNPSTREGETLPSDSSSEKRITATM
DDMLSARPGSLSGEEEEVKASETAKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCT
LLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPL
TYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPILDGLL
HWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYS
TMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQ
QSQAGLMHMQNPPFESTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNS
LVSQVICDVLFLIGQS
NT seq
6891 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcaggtcgcccccgccgccgccagcagcctgggcgccccggctccagccgag
ctgaagaaagcggaggcgcagcagcagcagcagcagcgggattgtcccccggaggaggcg
gggggtgaggcggcggcggagcgcggcggcggcggcggcgagaagcaggcggagagcgag
ggccccccggggaaggagctgcaggacggggccgagagcaacggagggggcgcaggggcc
gaggccgacctgaagagctcgaacgggaacccgggccccaggcccgccgctgccgccgcc
accctgaacaataacctcccggagccgcccggtggcggcggcggcggcggcagcagcgac
ggggtgggggcgccgcagcagcagcagcagcagccgccgcagcagcagcagcagcagcct
cccccttcccacccggccgccttgcccccgccagcctacggcttcgggcagccctacggc
cggggcgcccaggccgccgccgccgccgccgctgctgcggccgccgccgccgctgccttc
caccaacatggcggacaacaaagccctggcatggcagcgctgcagagcgggggcctggag
cagccctacccggggccgaccggagcccccgcggggccgccccctccccagaactcgcac
ggcggcgccgagcacggcttcgccaaccaccagtacaactcctactacgcggccggccgc
agcgccgcttcctacccgcctcccccccaggcctacgccctgagctccccccggggcagc
gctcagagctccgccggggctaagtcccccgccgccgccgccttccagcagcagcgcttc
ggggtcatggggccctcggcggccggcggcggagcaggaggagggggcgccaccccgcag
cccaccgccacccccaccctcaaccagctcctcacctcccccagctccgcccgcggctac
caggggtaccccgggggcgactatagcggcgggccgcaggacgggggagcagcagcagcg
gccgcagcagcagcagcagccaagggcccggcagccgcggatatggtctcgcagtacggc
gggggcaacagccagggctgggccgcggccggcggagcccccccgaggagccaccatgcg
cccatgagccccgggagcagcagcggcagcgggcagagcctcggcaggagccagcagcct
tcaagcccaatggatcagatggggaagatgaggcctcagccatacggaggaaacaaccca
tacacacagcagcagggacctcaggcggggccgcagcaaggacatggctatcccggacag
ccgtatgggccgcagactccccagagatatcccatgggaatgcaaagcaggacgcaaagt
acaatgagcagcatctcgtatgcacagcagattccgccttacggacagcagggtcccagt
gcatatgggcagcaaagccagactccatattacaaccagcaaagccctcatccccagcag
cagcagcctccatattctcagcagcctccatcccagacccctcactctcagccttcttat
cagcagcagcaacagcctcagtctcaacctccacaacttcagacatcgcagcctgcgtat
tctcagcagcagtcccagccaccccatcagcagtccccgactccatatcctcagcagcag
tccacagcccagcagcatcaacagagtcagcctccctactcccagcagcagtcacagtcg
ccctaccagcagcagcaacaaactcagcagacagcttcctcggctctttctcagcagtca
tcttcataccctcagtcgcagccgcagcagcagcagtctgcgtattcccagcaacgcttc
ccccctcctcaggagttatctcaagaatcatttgggtcccaggcatcatctgctccctca
atggcttccagtaaagggcaagaagacatgaacttgaatcttcagtccagaccttctagc
ctgccggacctgtctggttcaatagatgatctacccatgggtacagaaggagccctgagt
cctggagtaagcacatcagggatttccagcagtcaaggagagcagagtaacccagctcag
tctcctttctctccacatacctctcctcacctgccaggcattagaggaccctcaccatcc
cctgttggatctccagctagtgttgctcagtcccgttctggtccactttcacctgctgca
gtaccaggcaatcagatgccgccccgaccgcctagtggccaatcggacagtatcatgcat
ccttccatgaaccagtcgagcatagcgcaagatcgaggttatttgcagaggaatcctcag
atgccccagtacagctcaccccagcctggctcagccttatctccccggcagtcctctgga
ggacagatgcacgctggcatggggccataccagcagaactccatgggaagctacggaccc
cagggtgggcagtacggacctcaaggaggttatcccaggcagccaaactacaatgctatg
tccaatgccaactatcccagtccaggaatgggaggaagcatgaacccaatgggagcaggg
agccagatgcatgggcagactggtgtgccaccatacactgggcttcctccagggaggatg
agccatgccaccatggggaacagaccgtacggacctaacatggcgaatatgcctcctcag
gtggggacaggaatgtgccccccaccaggtggcatgaatcgcaaagcacaagaagcagct
gctgctgccatgcatgctgctgccaactccatccagaacaggcctcctggttatcccaac
atgaaccaaggaggaatgatgggcactggacctccttatgggcagggaattaacagcatg
gcaggcatgataaatccccagggcccaccctatccgatgggtgggaatatggccaacaac
tctgcagggatggcagcaagtcctgaaatgatgggtcttgcggatgtcaaactaacgcct
gcaactaaaatgaacaataaggccgatgggacgccaaaagcagaatccaagtcaaagaag
tccagttcctctactacgaccaatgagaagatcaccaaactctatgagctgggtggcgag
cctgagaggaagatatgggtagatcgttacctggccttcactgaagagaaggccatgggc
atgacaaacctcccagcagttggcagaaaacccttggacctttaccggctctacatctca
gtgaaggagattggaggattgactcaggtcaacaaaaacaagaaatggcgcgagttagcc
acaaatctcaatgtgggcacgtccagcagtgcagctagttctttgaagaagcagtacatc
cagtgtctctatgcctttgagtgcaagattgagcgaggtgaagacccccctccagatatc
tttgcagctgccgattcaaagaagtctcagactaagatacagcctccttctccagcgggt
tcaggctcgatgcaggggcctcagacacctcagtccaccagcagctccatggcagaagga
ggagacttgaagccaccaactccagcatctacgccacacagtcagatgccccctttgcca
ggcatcaggagtaactcggtgggccttcaggatgcctttacagatggcagtgatcccacg
ttccagaagcggaactccatgactccaaatccagggtaccagcccagcatgaatacctcc
gacatgatgggtcgcatgtcttatgagccaaataaagatccttacagcagtatgaggaaa
gctccaggaagcgatcccttcatgtcctcagggcagggccccaacagtggtatgggtgac
ccttacaatcgtgctgcaggtccagggatgggtaacatggccatgggacagcggccacac
tatccctacggaggtccttacgacagagtgaggacggagcctggcatgggacctgagggc
aacttagcagctggaactccgcagccaaacatcatgccttccaccccggaatcggggatg
tattctcccagccgctacccgcagcagcaacagcagcagcaaagacatgattcctatggc
aatcaattctcctctcaaggcacatcctcgggcagccccttccctagccagcaaactacc
atgtatcaacagcaacagcagaactacaagcgaccgatggatggcagctacggcccgccc
gccaagcggcacgaaggggagatgtacaacgtcccgtacagcgccgggcaggggcagacg
cagcagcagctgcctccagcacagacccagcagccgagccagcagcaaactgcgcagccg
tctccccagcaggacttgtataaccagtatgggagtacataccctgctgctgaccgccga
tctgccggagggccacagaaccagttcccattccaatttggcagagacagggtctcggct
cccccgggctccaatgctcagcaaaatatgcctcctcagatgatgggtggccccatccag
tctgctccagagggcccccagcaaggcgccatgtggcaagggcgcaacgaaatagggtac
agctatccaaatcggcagagcaccggctctgcgccccaggggcctgcttatcacggagtg
actcgaacagatgaaattctgcattcagaacagagggtaaaccacgagggaccgtggtcc
tcccacgggaaccggcaacctccttatggtccctctgcccccgtgcccccgatgaccagg
ccccctcagtctaactaccagacccctcctagcatgcagaatcacattcctcaggtatcc
agcccagcacctctgcccagacctctggagaatcgcacttctcccagtaaatctccattc
ctgcactcggggatgaaaatgcagaaggcaggaccaccagtcccggcctcgcatataaca
ccagcagctgtacagcctcccatgatccgacgagacatcaccttccctccgggatcagta
gaagctacgcaacctgtactgaagcaaaggaggcggctgacagcaaaagatattggaact
cctgaagcctggagagtgatgatgtctctgaagtccgggctgctagctgaaagtacgtgg
gccttagataccataaacatcctgctctatgatgacaacagcataatgaccttcaacctc
agccagctgccaggcttgctggaactcttggtggagtatttccggcgctgcctgatcgag
atctttggaatcctgaaggaatatgaggtgggagacccagggcaaagaacactattagat
cccgaaaggttctgcagatcttcatcttcctctcatgaagaaggggaggaggatgacgaa
ccacggagcctgaactgtgaggaggaggaagaggacgaggaagaggaggaggctgcgttt
tcaggcaaggacaaagtacctctagagagcagcgaggagaaactagttagtaaatttgac
aagcttccagtcaaggtcgtgcagaaaaatgacccgtttgtggtagattattcagacaag
ctggggcgagtgcaggagttcgacagtggactgctgcactggcggatcggtggcggagat
accaccgagcacattcagacccactttgagagcaagatggagctacctttgactcacaaa
cgagcttcctgcaactctgtcttgaggaaacgttcagcagctgagagcaatccgagcact
agggaaggagagacccttccttctgacagctcctcggagaagaggataactgccaccatg
gacgacatgctttcggcacgtccgggctccctgtcaggggaggaggaagaggtcaaagct
tcagaaactgcgaaggaaagcagcaagtttccattcggcattagtccagctcagagccac
agaaatataaaaattctggaggacgaacctcatagtaaagacgagacacctctctgcacc
ctcctagactggcaggactctctggcgaagcgctgcatctgtgtctctaatatcatcagg
agtttatcgtttgtgccgggcaatgactttgaaatgtctaaacaccccgggctgctgctg
attctagggaaactgattctcctacaccacaagcatccagagcgcaagcaggcacccctg
acctacgagaaagaggaggagcaggaccaaggggtgagctgcaacaaggtggagtggtgg
tgggactgcttggagatgctgcgtgaaaacacactggtcacgttggccaacatttctggc
cagctggacctctccccttacccagaaagcatctgtttgcctatcctggatggactcctc
cactgggcggtctgtccgtcagcagaggcccaggatccctttccaacgctggggccaaat
gctgtcctctcccctcagagactggttttggaaacactcagcaaactcagcatccaggac
aacaatgtggatttgattcttgcaactccccccttcagtcgcttggagaagctgtacagc
accatggtgcgtttccttagtgacagaaagaacccggtgtgtcgagagatggctgtggta
ctactggccaacttggcacagggggacagcctggcagcaagagcgattgctgtgcagaag
ggcagcattggcaacttgctgggcttcttggaggacagcctggccgccacgcagttccag
cagagccaggccggcttgatgcacatgcagaacccaccctttgagtcgacgagcgtggac
atgatgcgccgagctgctcgggcgctgctcgccctggccaaggtggacgagaaccactcg
gagttcacgttatacgagtcgcggctgttggacatctccgtgtcgcctttgatgaactct
ttggtttcacaagttatttgtgatgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
