Anas acuta (northern pintail): 137843025
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Entry
137843025 CDS
T11380
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu03082
ATP-dependent chromatin remodeling
aacu03083
Polycomb repressive complex
aacu04110
Cell cycle
aacu04330
Notch signaling pathway
aacu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137843025 (HDAC1)
03083 Polycomb repressive complex
137843025 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
137843025 (HDAC1)
04350 TGF-beta signaling pathway
137843025 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
137843025 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aacu03036
]
137843025 (HDAC1)
Enzymes [BR:
aacu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
137843025 (HDAC1)
Chromosome and associated proteins [BR:
aacu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
137843025 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
137843025 (HDAC1)
BRAF-HDAC complex
137843025 (HDAC1)
REST complex
137843025 (HDAC1)
SHIP complex
137843025 (HDAC1)
MiDAC complex
137843025 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
137843025 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
137843025 (HDAC1)
Chromatin remodeling factors
NuRD complex
137843025 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
137843025
NCBI-ProteinID:
XP_068513922
LinkDB
All DBs
Position
21:complement(7389875..7403754)
Genome browser
AA seq
480 aa
AA seq
DB search
MALTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVISKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQPIPEDAVQEDSGDEEEEDPEKRISIRNSDKRISCDEEF
SDSEDEGEGGRKNVANFKKAKRVKTEEEKEEEEKKEEKEEEKAKEEKPEPKGVKEETKST
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacgcagggcaccaagcggaaagtctgctactactacgacggtgatgttggg
aactattattatggccaagggcatccgatgaagccccacaggatccggatgacccacaac
ctgctgctgaactacggcctctacaggaagatggagatctatcgccctcacaaggcaaac
gcagaagaaatgaccaagtaccacagcgacgactacatcaagttcctgaggtctatccgc
cccgataacatgtctgagtacagcaagcagatgcagagattcaacgttggggaggactgc
cccgtgttcgatgggttgtttgagttttgtcagctctctgctggaggctctgtggccagt
gctgtgaagctgaacaagcagcagacagacatcgctgtgaattgggcagggggccttcac
cacgctaagaagtcggaggcttctggcttctgctacgtcaacgatattgtcctagccatc
ctggagctcctcaagtatcaccagagagtgctgtacattgacatcgatattcaccatggg
gatggcgtggaggaagccttctataccacagaccgtgtgatgaccgtgtccttccataag
tacggagaatacttcccaggaacaggggacctacgggacattggtgcaggcaaaggcaag
tactatgctgtcaactaccccctccgtgatggaatcgatgacgagtcctatgaggcgata
ttcaagccggtgatatctaaagtgatggagacgttccagcctagcgcagttgtcttgcag
tgtgggtcggattctctgtcaggagacaggctgggctgttttaatctgaccatcaaaggt
catgccaagtgtgtggagtttgtaaaaagttttaatttgcctatgctgatgctgggagga
ggtggctatacgatccgcaacgtggctagatgctggacctacgaaactgctgtggctttg
gacactgaaatcccaaacgaacttccatataacgactattttgagtactttggaccagac
tttaagctgcacatcagtccctccaacatgactaaccagaataccaacgagtatctcgag
aagatcaagcaacgtctctttgagaatctgcgcatgctgcctcatgcccctggtgtccag
atgcagccaattcccgaagatgctgttcaggaagacagtggagatgaagaggaagaagat
cctgagaaacgcatttcaatccgcaattctgataagagaatatcgtgtgatgaagaattc
tctgactctgaagatgaaggggaaggagggcgcaaaaacgttgccaactttaagaaagcg
aagcgtgtgaaaacagaagaggaaaaggaggaagaggaaaagaaagaggaaaaagaagag
gaaaaagcaaaagaggaaaaaccagaacccaaaggggtgaaggaagagacaaaatctacc
taa
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