Anas acuta (northern pintail): 137844023
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Entry
137844023 CDS
T11380
Symbol
PPFIA4
Name
(RefSeq) liprin-alpha-4 isoform X1
KO
K26226
liprin-alpha
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137844023 (PPFIA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aacu04131
]
137844023 (PPFIA4)
Membrane trafficking [BR:
aacu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
137844023 (PPFIA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
137844023
NCBI-ProteinID:
XP_068516039
LinkDB
All DBs
Position
24:complement(4501403..4545358)
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AA seq
1231 aa
AA seq
DB search
MMCEVMPTISEGDPLGPPQGSEADADFEQLMVNMLDERDKLLDTLRETRETLSVTQSRLQ
EALRERDQLQRQLNSALPQEFATLTRELSACREQLLEREEEISELKAERNNTRLLLEHLE
CLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRASLERV
ATLEEQLVDAHRQVAALQQGATREAPAGERDEREPKEPAQKLPWKRLSNGSVHPDDEAGR
VVELQELLEKQNFEVVQAKERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDLREA
LAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLESELANKESLHRQCEEKARHLQELL
ELAEQKLQQTMRKAETLPEVEAELAQRIAALSKAKERHGSIEEHLRQLESQLEEKNQELA
RARQREKMNEEHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKNTLLQELENTQKQIE
EHQHDKRRLSDEIDKLRLEVDQLKTRSGTFVESVHTRSHMGSATDLRFPLSAVVHAPAEP
FGTAPGLPRTQKGRFAARREEPAKDWEQAQAGSVLATGPHAFDSDPEISDVDEDDRETLF
SSMDVLSPGGHSDAQTLAMMLQEQLDAINEEIRMIQEEKESTELRAEELETRVTSGSMEG
LNLTQLCKRASIPTSLTALSLASSSPPLSGRSTPKLTSRSAAQDLDRMGIMTLPSDLRKH
RRKLLSPAARDESREDKTTIKCETSPPSSPRTLRLEKLGHPALSQEDGKSSLEEQASNPS
SNSSQDSLHKGSKRKGIKSSIGRLFGKKEKGRLIQLSREGATGQVLLTDTEVGIQDPLGL
GKLGAQAEKDRRLRKKHELLEEARRKGLPFAHWDGPTVVSWLELWVGMPAWYVAACRANV
KSGAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHE
EMENMATSTKTDTEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLD
HLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREETQHEIKDVLVWTNDQ
VIHWIQSIGLREYANNLVESGVHGALLALDENFDHNSLALVLQIPTQNTQARQVLEREFN
NLLALGTDRRLDDGDDKTFRRTPSWRKRFRPRDVHSINMLSGSAETLPAGFRVTSLVPLP
PPSAPAKKMPPEVGASGSPRLETSTVRTYSC
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatcagcgagggggaccccctgggccccccccagggc
tccgaggcggatgccgacttcgagcagctgatggtgaacatgctggatgagagggacaag
ctgctggacaccctgcgggagacccgcgagacgctctccgtcacccagagccgcttgcag
gaggccctccgggagcgggaccagctccagaggcagctcaactctgccctcccgcaggag
ttcgccacgctgacgcgggagctcagtgcgtgccgagagcagctcctggagagggaggag
gagatctcagagctgaaagctgagcgcaacaacacccggctcctgctggagcacctggag
tgcctggtgtcgaggcatgagcggtccctgaggatgaccgtggtcaagcgtcaggcccag
tcgccgtctggggtttccagtgaggtcgaggtgctcaaggcactcaagtcactctttgag
catcacaaggcgctagatgaaaaggtcagggagcgcttgcgagcatccttagagcgagtg
gcgaccttggaggagcagctggtggatgcccatcggcaggtggcagctctgcagcaaggc
gccacgcgggaggccccagcaggcgagcgggatgagagggagcccaaggagccggcgcag
aagcttccctggaagcggctctccaacggctccgttcaccccgacgatgaggcagggcgg
gtggtggagctgcaggagctcctggagaagcagaatttcgaagtggtccaagccaaggag
cgcatctccgccctggctgccagcgtcgcggagctggaggaggatctgggcaccgccagg
aaggatctgatcaagtcagaggagatgagcagcaagtaccagcgggacctccgagaggct
ctggctcagaaggaggacatggaagagaggatcaccacgctggagaaacgctacctagca
gcccagcgagaagctacctccatccacgacctcaacgacaagctggaaagcgaactggcc
aacaaggagtccctgcaccgccagtgcgaggagaaagcccggcacctgcaggagctgctg
gagctggcggagcagaagctgcagcagacgatgcggaaagcagagacgctgcccgaggtg
gaagcggagctggcccagcgcatcgcagcgctcagcaaggcaaaagagaggcatgggagc
atcgaggagcacctccggcagctggagagccagctggaagagaagaaccaggagctggcc
agggcccgccagcgggagaagatgaacgaggagcacaacaagcggctctcggacaccgtg
gaccggctgctgagcgagtcgaacgagcggctgcagctgcacctcaaggagaggatggca
gccttggaggagaagaacacattgttacaagagctggaaaatacccaaaagcagatagag
gaacaccagcacgacaagcgccggctgtcagacgagatcgacaaactgcggctggaggtc
gatcagctcaaaaccaggagcgggacgttcgtggagagcgtgcacacgaggtcccacatg
ggcagtgccacggacctgcgcttcccactcagcgccgtggtccatgcccccgctgagccc
tttgggacggccccaggcctgcctcggacacagaaagggcgattcgctgcccggcgagag
gagccggccaaggactgggagcaggcccaggcaggcagcgtcctggccacggggcctcac
gccttcgacagcgaccctgagatctccgacgtggatgaggatgaccgcgagacgctcttc
agctccatggacgtgctctcccctggtgggcactcggatgctcagaccttggccatgatg
ctccaggagcagctggatgccatcaacgaggagatcaggatgatccaagaggagaaggag
tccaccgagctccgcgcggaggagctggagacgcgcgtgaccagcggcagcatggaaggc
ctcaacctcacccagctgtgcaagagggcctccatccccacctcgctgacggccctgtcc
ctggccagctcgtccccaccgctcagtggccgctccaccccaaagctgacctcccgaagc
gctgctcaggacctcgaccgcatggggatcatgacgctgcccagtgacttgaggaagcac
cggaggaaactgctatcacccgcagctcgggatgaaagccgagaggacaaaaccaccatc
aaatgcgagacttcccccccgtcctcgcccaggacgttgcggctggagaagctgggtcac
cccgcgctgagtcaggaggacgggaagagctccctggaagagcaggccagcaaccccagc
agcaacagcagccaggactccttgcacaagggctccaagaggaaggggatcaaatcttcc
atcgggcgcttgtttgggaaaaaagagaagggccgcttgatccagctgagcagagaaggg
gccacagggcaggtgctgctgaccgacaccgaggtgggcatccaggaccctctgggcctc
ggcaagctgggtgctcaggctgagaaggatcgtcgcctgcggaaaaagcacgaactcctg
gaagaggctcggaggaaaggattgccctttgcccactgggatggccccaccgttgtctcc
tggctggagctctgggtgggaatgccagcctggtacgtcgccgcttgccgagccaacgtg
aagagcggagccatcatgtcagccctgtccgacaccgagatccagagggagatcggcatc
agcaacgcgctgcaccgcctgaagctgcgcctggccatccaggagatggtttcgctcacg
agcccctcggcaccacccacctcacggacatcctctggaaacgtctgggtcacccacgag
gagatggagaacatggccacgtccaccaagacggacacagaggaaggcagctgggcacag
acgctggcttatggggacatgaaccatgagtggattgggaacgagtggctgcccagcctg
ggcctcccgcaatatcgcagctacttcatggagtgtctcgtcgatgcacggatgctggac
cacctcaccaagaaagatctcagagtgcacctgaagatggtggacagcttccaccgcacc
agcctgcagtatggcatcatgtgcctgaagaggctcaactacgaccgcaaagagctcgag
aggaggcgagaagagacccagcacgaaatcaaagatgtgttggtgtggaccaacgaccag
gtcatccactggatccagtccatcgggcttcgcgagtacgcgaacaacctcgttgagagc
ggggtgcacggggcgctgctggccctcgacgaaaacttcgaccacaacagcctggcgctt
gtcttgcaaatccccacgcagaacacgcaggctcgacaagtgctggagagggagttcaac
aatctgcttgcattgggcacggatcgaaggctggatgatggcgacgacaaaaccttccgt
cgaaccccgtcctggcgaaagcgcttccgcccacgagatgttcacagcatcaacatgctc
agtggctcggccgagacgctgcccgccggcttccgtgtcaccagcctggtgcccctgcca
cccccatccgcccctgccaagaaaatgcccccagaagttggtgcctctgggtcgccacgg
ctggagacctccacggtccggacgtactcctgctga
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