Anas acuta (northern pintail): 137844676
Help
Entry
137844676 CDS
T11380
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
aacu
Anas acuta (northern pintail)
Pathway
aacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137844676 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aacu03041
]
137844676 (DDX42)
Enzymes [BR:
aacu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137844676 (DDX42)
Spliceosome [BR:
aacu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
137844676 (DDX42)
Complex B
137844676 (DDX42)
Complex C
U2 SnRNP specific factors
137844676 (DDX42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
DUF460
Motif
Other DBs
NCBI-GeneID:
137844676
NCBI-ProteinID:
XP_068517305
LinkDB
All DBs
Position
25:complement(3261339..3278640)
Genome browser
AA seq
943 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFAITPGKKEEPKLSQQSHSAFGTAGSSAAFAKSGPPQLPSFY
KIGSKRANFDEENAYFEDEEEDNSNVDLPYIPAENSPTRQQFHSKSADSDSDDDPLEAFM
AEVEDQAARDMKRLEDKDKEKKNAKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
LEYDSDGNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQ
VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPS
GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKV
ISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNPWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSESSDRGNNNSVMSNYEAYKPSSGAMGDRLTAMKAAFQSQYKSHFVAASLNNQ
KTGSSAAGASGWTSAGSLNSVPTSSAQQNSANPDSPIAAAAAAKGVPGFTSTGNLSSVPT
FPSVGVQGYNNNTTNASTNNREGIGSTGVAPGGGGGGSGGGVVRERYNDSRNSRHNEAPR
RGEGGGGRYNDVQRHGEGGGRHSDAYRHGEGRHGDNHRHAESRHFTDGSGGNRNNGESRN
IGEGRNNENRNGENRKDANSRDNKTDGFAVPEPPKRKKSRWDS
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaattggaataaaggtggacctggtacaaagagaggctttggttttggtggatttgcc
ataacgcctggaaagaaagaggagcccaagctttctcaacagtctcatagtgcttttgga
acagccggttcctctgctgcatttgcgaaatcgggacctccacagctgccttcgttctac
aaaattgggtcaaagcgagcaaattttgatgaagagaacgcgtactttgaggacgaagag
gaagataacagcaatgttgacttgccatacattccagcggagaattcccccactcgccag
cagtttcattccaaatcggcagactctgacagcgacgatgatcctctggaggcattcatg
gctgaagtggaggatcaagctgctcgagacatgaagagacttgaagataaagacaaggaa
aaaaagaatgctaagggtattcgagatgacattgaagaggaagatgaccaagaagcttat
tttcgctacatggctgaaaaccctactgctggtgtggtacaagaagaggaagaggataac
ctcgagtatgacagtgatgggaacccaattgcaccgtccaaaaaaatcattgatcccctt
ccacctattgaccattcagagattgaatatccgccttttgagaaaaatttctatgatgag
catgaggagatcaccagtctcaccccgcagcaagtggtggagttacgtcataagctaaat
ctccgggtctccggtgctgctcctccaagacctggcagtagctttgctcattttggattt
gatgagcaacttatgcatcaaattaggaaatccgagtatacccagcccactcctatacag
tgccagggtgttccagttgctttgagtggcagagatatgattgggatagctaagactgga
agtggaaaaacagcagctttcatctggcctatgttgattcacatcatggatcaaaaagag
cttgaaccaggggacggtcccattgcagtgattgtatgcccgaccagagagctttgccaa
cagatccattctgaatgtaagcgctttggtaaggcgtataatctgcgctcagtagctgtg
tatggaggaggaagcatgtgggaacaagccaaagccctccaggagggggcagagatagtt
gtttgcacaccgggtcgtttgattgatcatgtgaaaaagaaagctacaaaccttcaaaga
gtcacttacctcgtgtttgatgaagcagacagaatgtttgatatgggttttgaatatcag
gtcagatcaattgcaagccacgtacgtcctgacagacagaccctcttgttcagtgccact
ttccgtaagaagattgagaaattggcccgagatattctgattgacccaattcgagttgtg
cagggagacattggagaggcaaatgaagatgttactcaaattgtggagattttcccttct
ggccctagcaaatggaactggctgactcgacgcctcgtggagttcacatcttctgggagc
gttctcctgtttgtcaccaagaaggcaaatgcagaagagctggctaataacctcaagcag
gaggatcacaatctagggctgcttcatggcgacatggaccagagtgaaaggaataaagtc
atttcagaatttaagaaaaaagggatcccgatactggtagctactgatgtagcagctcgt
gggttagatattccttccattaagactgtgatcaattacgatgtggctcgggacatagac
acgcacacccacagaattggtcgtactggcagagcaggcgagaagggagttgcctacact
ctgttgactcccaaagacagtaacttcgctggtgatctcgtccgaaatctggaaggtgct
aatcaacatgtttccaaagagctgttggatctagcaatgcagaatccatggttccggaaa
tcccgtttcaaaggaggaaaaggcaagaagctgaatattggtggtggtggcttaggatat
cgtgagcgtcctggtctgggatcagaaagctctgaccgtggaaacaacaacagtgtgatg
agcaactacgaagcatataagccatcctctggggcaatgggcgacagacttacagcaatg
aaagcagcttttcagtctcagtataagagccactttgttgctgcaagcttaaataatcaa
aagactggaagctctgctgctggtgctagtggctggactagtgctgggagcttgaactca
gtaccaacaagttcagcacagcaaaattctgcaaatcccgacagcccaattgcagctgct
gcagcagccaagggtgttccaggtttcaccagcaccgggaatctgagtagcgttcccacc
ttcccaagcgtcggagtacagggctacaacaacaacaccacgaatgccagcaccaataat
cgagaaggcatcggcagcaccggtgtcgctcctggtggcggtggtggcggcagcggtggc
ggcgttgtcagagaacgatacaacgacagcaggaacagtcggcacaacgaggccccgcgc
cggggagagggcggtggcggtcgctacaacgacgtgcagcgccacggggaaggagggggc
cgccacagtgacgcttaccggcacggggagggccggcacggtgacaaccatcgccacgct
gaaagccggcatttcactgacgggagcggtggcaatcgcaataatggtgagagcaggaat
atcggcgagggtaggaacaacgagaacaggaatggtgagaacaggaaggatgccaacagc
cgggacaacaagacagatggttttgctgtcccggagcccccaaaacgtaagaagagtcga
tgggacagttaa
DBGET
integrated database retrieval system
