KEGG   Anas acuta (northern pintail): 137845909
Entry
137845909         CDS       T11380                                 
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain
  KO
K19719  collagen type II alpha
Organism
aacu  Anas acuta (northern pintail)
Pathway
aacu04510  Focal adhesion
aacu04512  ECM-receptor interaction
aacu04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:aacu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    137845909 (COL2A1)
   04518 Integrin signaling
    137845909 (COL2A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    137845909 (COL2A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:aacu00536]
    137845909 (COL2A1)
Glycosaminoglycan binding proteins [BR:aacu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   137845909 (COL2A1)
SSDB
Other DBs
NCBI-GeneID: 137845909
NCBI-ProteinID: XP_068519531
LinkDB
Position
29:1961695..1974074
AA seq 1165 aa
MGPRGLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGA
RGPEGAQGPRGESGTPGSPGPAGAPGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGP
QGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGEEGKRGARGEPGAAGP
VGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGLAGPKGATGDPGRPGEPGLPGARGL
TGRPGDAGPQGKVGPTGSPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGL
PGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGESGKPGD
QGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGATGPAGPNGA
QGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGARGLTGPIGPPGPAGPNGE
KGESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGPPGADGQPGAKGEQGEPGQKGDAGA
PGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPPGPPGS
AGKDGPKGARGDAGPPGRAGDPGLQGPAGPPGEKGEPGEDGPAGPDGPPGPQGLAGQRGI
VGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVGPPGLTGPAGEPGREGNPGA
DGPPGRDGAAGVKGDRGETGPVGAPGAPGAPGAPGPVGPTGKQGDRGETGAQGPMGPSGP
AGARGMPGPQGPRGDKGETGEAGERGLKGHRGFTGLQGLPGPPGPSGDQGAAGPAGPSGP
RGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPPGNPGPPGPPGPPGTGIDMSA
FAGLGQTEKGPDPIRYMRADEAAGGLRQHDVEVDATLKSLNNQIESIRSPEGSKKNPART
CRDIKLCHPDWKSGDYWIDPNQGCTLDAIKVFCNMETGETCVYPTPSSIPRKNWWSSKAK
DKKHVWFAETINGGFHFSYGDESLSPTTASIQLTFLRLLSTEGSQNVTYHCKNSIAYMDE
ETGNLKKALLIQGSNDVEIRAEGNSRFTYSVLEDGCTKHTGKWGKTVIEYRSQKTSRLPI
VDIAPMDIGGAEQEFGVDIGPVCFL
NT seq 3498 nt   +upstreamnt  +downstreamnt
atgggtccccgcgggctgccaggagagcgaggacgtcccggcccctccggcgctgcgggt
gctcgcggcaacgacggtctccccggccccgctggcccccccggacccgttggcccggcc
ggagcccccggcttccccggcgcccccggctcgaagggtgaagcaggtcccaccggcgca
cgaggtcctgagggtgcccaaggtccccgcggcgaatccggcacccccggctcccccggc
cccgctggcgcccccggcaaccccggcaccgacggcatccccggagccaagggctcggcg
ggtgccccgggcatcgcgggcgctcccggcttccccggcccccgcggcccccccggaccc
caaggtgccaccggcccgctgggacccaagggacagacgggcgaacccggcatcgcgggc
ttcaagggcgagcaaggacccaagggcgagacgggccccgcaggaccccaaggtgccccc
gggccggctggggaggaaggcaagagaggagcccgtggggaacccggtgctgccggcccc
gtgggcccccccggagaaaggggtgctcccggcaaccgcggcttccccgggcaagacggg
ctggctggacccaagggtgctccgggtgaacgcggccccgctggcctcgccggtcccaag
ggtgccaccggtgaccccgggcgtcccggagagcccgggctgcccggagcaaggggtctc
accggccgccccggcgatgctggacctcaaggcaaagtcggccccaccggctctcccggc
gaggacggtcgccccggcccccccggccctcagggtgcccgcgggcagcccggcgtgatg
ggtttccccggtcctaaaggcgctaacggtgagcctggaaaagctggcgaaaaagggctg
cccggtgccccggggctgcggggtcttcctggcaaggatggtgagacgggagctgccggc
ccccccggacctgccggtcccgctggtgagagaggagagcaaggagcccccggtccctcc
ggcttccaggggctgcccgggccaccaggtccccccggagagagcggcaaacccggagac
cagggtgttcccggagaagccggtgcccccggtctcgtcggtcccagaggcgaacgcggc
ttccccggtgagcgcggctcccccggcgcacaagggctgcagggtccccgcgggctcccc
ggcacgccaggcaccgacggacccaagggtgcaaccggcccggccggccccaatggtgcc
cagggacccccagggctgcagggaatgcccggagagagaggagcagctggcatcgccggc
cccaagggtgaccggggagacgtcggtgagaagggtcccgagggagctccagggaaggac
ggcgcacgcggtctgaccggtcccatcggcccccccggccccgctggccccaacggcgag
aagggtgaatccggcccccccggtccttctggcgctgccggtgcccgcggtgcccctggt
gagcgtggcgagcccggtgcccccggccctgctggatttgccggccccccgggtgccgac
ggacaacccggtgccaaaggcgagcaaggagagcccgggcagaagggtgacgccggcgct
cccggtccccaaggtccctcgggcgcacccggcccccagggtcccactggtgtaactggt
cccaaaggagcccgcggtgctcagggtccccccggagccaccggattccccggagccgcc
ggccgcgtgggaccacccggccctaatggtaacccaggcccccccggcccccctggctct
gctggcaaggacggtcccaagggtgctcgtggcgacgccggtccccccggccgtgccgga
gaccccgggctccaaggccctgctggcccccctggcgagaaaggcgaacctggagaggac
ggccctgcgggtcccgacggtccccccggtccccaaggcttggcaggacagcgcggcatc
gtcggtctgcccggacagcgcggcgagagaggcttccccgggctgccagggccatcgggc
gaacccggaaagcaaggagcacccggctctgcaggcgaccgaggcccccctggccccgtg
ggtccccccggtctcacaggtcctgctggcgagcctgggcgcgagggcaaccctggtgct
gacggccccccaggcagagacggcgcagctggcgtgaagggcgatcgcggcgagaccggc
cccgtgggtgcccccggcgctcccggtgcccccggcgctcccggccccgtcggtcccacc
ggcaaacaaggagacagaggcgagacgggtgcacaagggcccatgggtccctccggtcct
gctggcgctcgaggcatgccgggtccccaagggcctcgcggtgacaaaggtgagactgga
gaggctggagagcgagggctgaagggccaccgcggcttcaccggactgcagggtcttcct
ggcccccccggtccttctggagaccaaggcgctgctggtcctgctggtccctccggcccc
agaggtccccccggccccgtcggcccctccggcaaagacggctccaacggcatgcccggc
cccatcggcccccccggcccccgcggacggagcggcgaacccggccctgcgggtcctcct
ggaaatcccggcccccccggtccccccggccctcccggcaccggtatcgacatgtcagct
ttcgccggtttgggtcagacggagaaaggccccgaccccatccgctacatgcgggcggac
gaggccgccggcgggctgcggcagcacgacgtggaggtggacgccaccctcaaatccctc
aacaaccaaatcgagagcatccgcagccccgagggctccaaaaagaacccggccaggacc
tgccgcgacatcaagctctgccaccccgactggaagagcggagactactggatcgacccc
aaccagggctgcaccctggatgccatcaaggttttctgcaacatggagacgggcgagacc
tgcgtctacccgacccccagcagcatccccaggaagaactggtggagcagcaaggccaaa
gacaagaagcacgtctggttcgcagagaccatcaacggcggcttccacttcagctacggc
gatgagagcctttcccccaccaccgccagcatccagctgaccttcctccgcctgctgtcc
accgagggctcccaaaacgtcacctaccactgcaagaacagcatcgcctacatggacgag
gagacgggcaacctgaagaaagccctcctcatccagggctccaacgacgtggagatcagg
gccgagggcaacagcaggttcacctacagcgtcctggaggacggctgcacgaaacacact
ggcaaatggggcaagacggtcatcgagtaccggtcgcagaagacctcgcgcctgcccatt
gtagatattgcacctatggacattggtggcgccgagcaggagtttggcgtggatatcggc
cccgtctgcttcttgtaa

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