Anas acuta (northern pintail): 137848267
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Entry
137848267 CDS
T11380
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
137848267 (APTX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aacu03400
]
137848267 (APTX)
Enzymes [BR:
aacu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
137848267 (APTX)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
137848267 (APTX)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
137848267 (APTX)
DNA repair and recombination proteins [BR:
aacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
137848267 (APTX)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
137848267 (APTX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
zf-C2H2_4
zf-C2H2_6
zf-C2H2
NicX
Motif
Other DBs
NCBI-GeneID:
137848267
NCBI-ProteinID:
XP_068523383
LinkDB
All DBs
Position
Z:63463601..63471889
Genome browser
AA seq
362 aa
AA seq
DB search
MRACWLVPGDGGGGRRVPLAHAAAVVLGRGPETGITDRRCSRRQVQLQADCSKGYVTVRQ
VCCCTSSVWYCAGVNPTSVDLVDVGKDEEVKMRPGQVLHIVNKLYPYTVQFAEESGKDVT
EAEEKVQAEKRPCEDSSENDDIENVPRKAKKTEVVDTQGSSAELKLSKTSVFPQEGTSSK
KEHLGHWSQGLKSSMQDPKMQVYKDEKTVVIKDKYPKARYHWLILPWESIPSLKTVTREH
LGLLEHMHAVGEKMIDQCPARGSLEFRLGYHAIPSMSHLHLHVISQDFDSAALKTKKHWN
SFTTEYFLNSQDVIEMVRSKGKVTVKDHASELLKLPLRCHICKQQLSTIPQLKEHLRKHW
PK
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgtgctggctggtgccgggggacggcggcggcggccggcgggtgccgctggct
cacgcggctgccgtggtgctggggcgcggccccgagacggggataacggacaggaggtgc
tcgcggcggcaagttcagctccaagccgactgcagcaaggggtacgtcacggtgaggcag
gtatgctgctgcaccagctctgtgtggtactgtgcaggagtcaacccaactagtgttgat
ttagtggatgttggcaaggatgaagaggtgaaaatgaggccaggccaagttctgcacatc
gtgaataagctttacccctacaccgtgcaatttgctgaagaatcggggaaagatgttaca
gaagcagaagagaaagtacaagctgaaaagaggccatgtgaggactcctctgagaacgat
gatatagaaaatgtgcccaggaaggcaaagaaaacggaggtggtggatacacaaggcagt
tctgcagagctcaagctaagcaagaccagtgtgtttccacaggaggggacttcgagcaaa
aaggaacatttaggacactggagtcagggtctgaagagttccatgcaagatccaaaaatg
caggtttacaaagacgagaagactgtagtcatcaaagacaaataccctaaagcacgctac
cactggcttattttgccatgggaatccattccaagcctgaagacggtcaccagggagcat
cttgggctcctggaacacatgcatgcagttggggaaaaaatgatcgaccagtgccctgct
cgaggcagcctggagttccggctgggctaccacgctatccccagcatgagtcacctgcat
ttgcatgtaatcagccaggattttgattctgctgccctgaaaaccaaaaagcactggaac
tcttttactacagaatacttcttaaactcccaagatgtgatagagatggtaagaagcaag
ggaaaggtaacagtgaaagatcatgcctctgaacttctcaaattgcccctcagatgccat
atttgcaaacagcagctatccactatcccacagctaaaggagcacctcaggaaacactgg
ccaaaatga
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