Anas acuta (northern pintail): 137848831
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Entry
137848831 CDS
T11380
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137848831 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aacu03041
]
137848831 (DHX16)
Enzymes [BR:
aacu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137848831 (DHX16)
Spliceosome [BR:
aacu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
137848831 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
137848831
NCBI-ProteinID:
XP_068524430
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MSPPQFLGLHAGGAEDWDHAAPARGCHERGRPGGRGDGDQTGQRGGVQHPFRGLHVGAHG
AEVHDGRHAAAGVPHRARPRILQRADGGRGPRAHAAHGRPFRAAEGHREVPSPPEGAGGL
GHPGHPALLRLLRPRARLPHPRQALPRRHLLHQGARGRLPGGVRGVGAADPRHAAPRGHP
RLPHRPGGDRGVRGAAAGALPAPGLQAGRAAGAAHLRQPPLRHAGTHLRAHPPRRPKGGG
RPQVVVATNIAETSVTIDGIVYVLDPGFCKQKSYSARTGMESLVVTPCSRASANQRAGRA
GRVAPGKCFRLYTAWAFQHELEETPVPEIQRADLGALVLLLKSLGINDLIHFDFLDPPPH
ETLVLALEQLYALGALNHLGELTTLGRRMAELPVEPMLAKMILASEQYGCTEEVLTVAAM
LSVNNAVFYRPKDKVLHADSARLGFHVPGGDHLVLLNVYNQWVASGHSVQWCYEHFVQAR
SLRRARDVREQLEGLMERVEIAPASCNGDLLPVRKAITAGFFYHTARLTRGGYRTVKHQQ
TVFVHPNSSLFHEQPRWVLYHELVFTTKEFMRQVIEIDSAWLLEVAPHYYQAKELEDAGA
RKMPKKLGKTREELAETPQGGFRITGGGLGTFGGFWGHPEAPNGVLGDENLAVPRAVLFL
G
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccccccaatttttagggttacacgcgggaggggctgaagattgggatcacgca
gccccggcgcgtggctgccatgagcgtggccgcccgggtggccgtggagatggggaccaa
actgggcaacgaggtggggtacagcatccgtttcgaggactgcacgtcggagcgcacggt
gctgaagtacatgacggacggcatgctgctgcgggagttcctcaccgagcccgacctcgg
atcctacagcgtgctgatggtggacgaggcccacgagcgcacgctgcacacggacgtcct
tttcgggctgctgaaggacatcgcgaggttccgtccccacctgaaggtgctggtggcctc
ggccaccctggacacccagcgcttctccgccttcttcgaccacgcgcccgtcttccgcat
ccccggcaggcgcttccccgtcgacatctactacaccaaggcgcccgaggccgactacct
ggaggcgtgcgtggtgtcggtgctgcagatccacgtcacgcagccccccggggacatcct
cgtcttcctcaccggccaggaggagatcgaggcgtgcgtggagctgctgcaggagcgctg
ccggcgcctgggctccaagctggccgagctgctggtgctgcccatctacgccaacctccc
ctccgacatgcaggcacgcatcttcgagcccaccccccccggcgcccgaaaggaggtggc
cgcccgcaggtggtggtggccaccaacatcgcggagacgtcggtgacgatcgacggcatc
gtctacgtgctggaccccggcttctgcaagcagaagagctacagcgcccgcaccggcatg
gagtccctcgtcgtcaccccctgctcgcgggcctcggcgaaccagcgggctggccgcgcg
ggccgggtggccccggggaaatgtttccgcctctacacggcctgggccttccagcacgag
ctggaggagacccccgtacccgaaatccaacgcgccgacctcggggccctcgtcctgctg
ctcaagagcctgggcatcaacgacctgatccacttcgacttcctggacccccccccccac
gagacgctggtgctggcgctggagcagctctacgcactgggagccctcaaccacctgggc
gagctcaccacgctgggccggcgcatggcggagctgccggtggagcccatgctggccaag
atgatcctggcctcggagcagtacggctgcacggaggaggtgctgacggtggcggcgatg
ctgtcggtgaacaacgccgtcttctaccggcccaaggacaaggtgctgcacgccgacagc
gcccgcctcggcttccacgtgcccggcggcgaccacctcgtgctgctcaacgtctacaac
cagtgggtggcgagcggtcactccgtgcagtggtgctacgagcacttcgtgcaggcgcgg
tcgctgcggcgggcgagggacgtgcgggagcagctggaggggctgatggagcgcgtggag
atcgcccccgcctcctgcaacggggacctgctgcccgtccgaaaggccatcaccgccggc
ttcttctaccacacggcgcggctgacgcggggggggtaccgcacggtgaagcaccagcag
acggtgttcgtgcaccccaacagctccctgttccacgagcagccccgctgggtgctctac
cacgagctcgtcttcaccaccaaggagttcatgcgccaggtgatcgagatcgacagcgcc
tggctgctggaggtggcgccccattactaccaggccaaggagctggaggacgccggcgcc
cgaaaaatgcccaaaaaattgggcaaaacccgcgaagaattggctgaaaccccccagggg
ggatttaggatcaccggggggggtttagggacatttggggggttttggggccatcccgaa
gcccctaatggggttttgggggacgaaaatctcgctgttccccgcgccgtgctgtttttg
gggtga
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