KEGG   Anas acuta (northern pintail): 137853472
Entry
137853472         CDS       T11380                                 
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
aacu  Anas acuta (northern pintail)
Pathway
aacu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:aacu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    137853472 (WDR43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aacu03009]
    137853472 (WDR43)
Ribosome biogenesis [BR:aacu03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    137853472 (WDR43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Utp12 Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_EML_2 WDR55 WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_EML WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_Aladin EIF3I Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_CAF1B_HIR1 Beta-prop_ACSF4 Beta-prop_RIG_1st Beta-prop_DCAF4 Beta-prop_WDR41 DUF6235 Methyltrans_Mon_3rd
Other DBs
NCBI-GeneID: 137853472
NCBI-ProteinID: XP_068531962
LinkDB
Position
3:16642961..16666797
AA seq 661 aa
MAAAAACGGEAAARPPLAFSPCDRRLLAVSGSDGRLRVWEAAGSRLRHEYVPSAHLSAAC
TCLAWAPPGGRPPPDKDGPQRKKRKSEAAEVDKQLDILAIGTAVGSILLYSTVKGELQSK
LDGGHDNRINCVRWHQDNYCLYSCSEDKHIVEWNTQTCKVKCKWKGDNSSVSSLCISPDG
KMLLSAGRTIKLWDLETKEVYRHFTGHATSVSSLMFTTVKPMNENKSFDGITGLYFLSGA
IHDRLLSVWQIRSDRKEKNAVMSFTVTDEPTFIDLTVSEVKEEPVKLAVVCRDGQLHLFE
HILNGYCKKPLTSNCTIQIATPGNDGDSTPKPVPILAAAFCTDKQSLLLVYGNTLQPIIE
KVSLNTSESHICLIRDVQKVLALKTEVAVTKVKTPVVNSDTKVLVPGIPGHSAAVKTPSS
GKEKNKSKRKPGEPEDSIEERLGALDIDVSKVKTPGGLPQTDSFAVLLVQGLESNDSDIL
NKVLNTRKETLIKNTVARMPIHAVIPLLHELTKRLQGNPYSASQMVRWLKSVFTLHASYL
STLPDLIPQLGMLYQLMESRVKTLQKLSRLHGRLFLLVTQVAASETVQDVTEVNQTAKLV
YEDESSEEEGSDDEMIADKDSDENWDEDEEKEEQSDEQDMTVEKEINGDSDLEPENESEE
E
NT seq 1986 nt   +upstreamnt  +downstreamnt
atggcggcggcggcagcgtgcggcggggaggcggcggcgcggccccccttggccttctcg
ccctgcgaccggcggctgctggccgtcagcggctcggacgggcggctgcgagtctgggag
gcggcgggcagccggctgcggcacgagtacgtgccctccgcccacctcagcgccgcctgc
acctgcctggcctgggccccgccgggggggcgcccgccccccgataaggatgggccccag
aggaaaaaacggaagtctgaagctgcagaagtggacaagcagttggatatcctggctatt
ggcacagcagttggtagcattttgttgtacagcacagttaaaggagagttacagagcaag
ctagatggtggtcatgacaatagaataaattgtgtgaggtggcaccaggacaactactgt
ttgtatagctgttcagaggacaaacacattgtggaatggaacacacagacctgcaaagta
aagtgtaagtggaaaggcgacaatagcagtgtcagctctttgtgcatcagtccagatggg
aaaatgctgctttcagctggtagaactataaaactgtgggacctggagaccaaagaagtc
tacagacatttcacaggccatgccacatcagtgtcatcattaatgtttactacagtgaag
cctatgaatgaaaataagtcctttgatggaattacagggctttatttcttgtctggagct
atacatgaccggttactgagcgtatggcagatcagatcagataggaaagaaaagaatgct
gtgatgtctttcacagtaacagatgaaccaacttttattgacctgactgtttcagaagtc
aaagaagagcctgtgaagttagcagttgtgtgcagagatgggcagttgcatttatttgaa
cacattttaaatggttactgcaaaaaacccttaacgtcaaactgtactatccagatagca
acacctggaaatgatggggactccacgccaaaaccagtccctatcctagcagctgcattt
tgcacagacaaacagtctctgctgcttgtgtatggaaacaccttacagcccatcatagag
aaagtgtctttgaacacctctgaatcccacatatgtttgataagggatgtccagaaagtg
ttggcacttaaaacagaagttgctgtaacaaaggtaaagacgccagttgtgaactcagac
accaaagttctagtgcctggcatcccaggacatagtgcagctgttaaaactccatcctca
ggaaaggagaaaaataaaagcaagaggaaaccaggagagccagaggacagcattgaagag
cgcctaggggctttggatatcgacgtgagcaaagtgaaaactccaggtggccttccgcaa
acagatagctttgcagtactgttggttcagggcttggaaagcaatgattcagacatctta
aataaagtgcttaacacaagaaaggaaactttaataaagaacacagtagccagaatgcct
atacatgctgtcattccactgctgcatgagcttacaaagagattgcaaggcaacccatac
agtgcctcacaaatggttcgatggctgaagtctgtttttactctacatgcatcctacctt
tccacattgccagaccttattcctcagctgggaatgttataccagttaatggagagcaga
gtaaaaactctgcaaaagctttcccgtctacatggaagacttttccttcttgtcacccag
gttgcagcgtcggaaacagttcaggatgtaactgaagttaaccagactgcaaagctggta
tatgaagacgaatcctcagaagaggaaggttcagatgatgagatgattgcagacaaagac
tcagatgaaaactgggatgaagacgaagaaaaagaggagcaatcagatgagcaagacatg
actgttgaaaaggaaatcaatggcgattctgatttggaaccagaaaatgaaagtgaagaa
gaataa

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