Anas acuta (northern pintail): 137853556
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Entry
137853556 CDS
T11380
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137853556 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aacu03019
]
137853556 (DIS3)
Messenger RNA biogenesis [BR:
aacu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
137853556 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
ASPRs
Toxin_R_bind_C
Hydrolase_6
Motif
Other DBs
NCBI-GeneID:
137853556
NCBI-ProteinID:
XP_068532141
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All DBs
Position
1:complement(42183690..42213886)
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AA seq
961 aa
AA seq
DB search
MLTSRTFLKRTRAGSVLKVVREHYLRDDIPCGAAACSLCPPRPDGSPSALEERPSGAASS
LCPGPHYLLPDTNLLLHQIDILEDPVIKNVIVLQTVLQEVRNRSAPVYKRIRDVIGNPEK
HFYSFTNEHHRETYIEQQQGESSNDRNDRAIRVAVKWYNEHLKKMQNEEIQVIFLTNDRN
NKEKALEEGITAYTCEEYIKSLIANPELVDRLACVSDEGKEIESGKIIFPEHLPLSKLQQ
GIKSGIYLQGTYRASRDNYLEATVWVHGDAEENKEIIIQGLKHLNRAVHEDIVAVELLAK
DEWVAPSSVVLQDDGQNEDDIETEEEKENILKTSDNKSMLRPTGKVVGIIKRNWRPFCGM
LSKSQIKEARRHLFTPADRRIPRIRIETRQADTLEGQRIIVAIDGWPRNSRYPNGHFVKN
LGTAGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKYREDLRHLCVCSVD
PPGCTDIDDALHYREMENGNLEVGVHIADVSHFIRPGNALDEESAKRGTTVYLCEKRIDM
VPELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSIINSKASLTYAEAQMRIDS
ASMNDDITVSLRGLNKLAKILKKKRIDNGALTLSSPEVRFHMDSETHDPIDLQTKELKET
NSMVEEFMLLANVSVAQKIYDEFPEFALLRKHPAPPPSNYDILVKAAKSKDLEIKTDSAK
ALAESLDKAESPASPYLNTLLRILTTRCMMQAVYFCSGMDNDFHHYGLASPIYTHFTSPI
RRYADIIVHRLLAVAIGADSTYPELTDKHKLSDLCKNLNYRHKMAQYAQRASVAFHTQLF
FKTKGVVNEDAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPTPRLDYNNEVPSLTVEDT
TLHVFDKVKVNVMLDDSNIQHQKIRMVLVEPKIPGNDVPAQLSTAMSSNSEPEKKKKKLQ
Q
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgctaacctcgcggaccttcctgaagcgcacccgggcgggctccgtgctgaaggtggtg
cgggagcactacctccgcgacgacatcccctgcggcgccgccgcctgctcgctctgcccc
ccgcgccccgacggcagccccagcgccctggaggagcggcccagcggcgcggccagcagc
ctgtgccccggcccgcactacctgctgccggacaccaacctcctgctccaccagattgat
atacttgaagatcctgttatcaagaatgtcattgtgctacagacagttttacaagaagtc
aggaatcggagtgcaccagtgtacaaacgaattagagacgtgattggaaacccagaaaaa
catttctattctttcaccaatgaacatcatcgagaaacatacatagagcaacagcaagga
gaaagttctaatgaccgcaatgacagagccattcgggtagcagtaaaatggtacaatgaa
cacttgaagaaaatgcagaatgaggagatccaagttatctttctaacaaatgacagaaat
aataaagagaaagcccttgaggaagggataactgcttatacatgtgaggagtatataaaa
agcttgatagctaatcctgaacttgtagatcgtcttgcttgcgtatctgatgaagggaaa
gaaatagaaagtggcaaaataattttcccagaacaccttcctcttagcaaattgcagcaa
ggaataaaatctggtatttacctccaaggaacctacagggcaagcagagataattatctt
gaagctactgtttgggttcatggagatgctgaagaaaacaaagagataattatacaaggt
cttaaacatttaaaccgagcagttcatgaagatattgtagctgtggagttgctggcaaaa
gatgaatgggtggcaccatcctcagtagtcttgcaagatgatggccagaatgaagatgat
attgaaactgaagaggagaaagaaaacattttgaagacttctgataacaagagcatgctg
agacctacaggaaaagtagtgggtattataaaacgaaactggcgaccattctgtggcatg
ctttccaaatcacagatcaaagaggcaaggcggcacttgtttacaccagctgatcgcagg
attcctcgtattcgaatagaaacaagacaagcagatacactggaaggacaaagaataatt
gttgctattgatggttggcccaggaattctaggtatcctaatggtcattttgtaaagaac
ttgggaactgctggagataaagagactgagacagaagttcttctgcttgaacatgatgtc
cctcatcaacctttttcacaggctgtccttagtttcctaccaaaaatgccatggagcatt
acagaaaaggatatgaaatacagggaggacttgaggcatctgtgtgtttgtagtgttgat
cctcctggttgtacggatattgatgatgcattacattacagagaaatggaaaatggaaat
ctggaggttggtgtacatattgcagatgtcagtcattttattcgcccaggaaatgctttg
gatgaggagtcagcaaaaagaggaacaactgtgtatctgtgtgaaaaaaggattgatatg
gttccggagttactgagttccaatttatgctccttgaggtcaaatgtggacaggcttgca
ttttcatgtatatgggagatgaaccataatgctgaaattctaaaaaccagatttacaaag
agtattattaattccaaggcttctctcacgtatgctgaagcacagatgagaattgattca
gcatcaatgaatgatgatattactgtcagtttacgtggactaaacaagttagcaaaaatt
ctgaagaagaagagaattgataatggagctttgacactttcctcaccagaagttcgtttc
cacatggacagtgaaactcatgatcctattgatctgcaaactaaggaacttaaagaaaca
aattccatggtcgaagagttcatgttgcttgccaatgtctctgtagcacaaaaaatttat
gatgagttcccagagtttgccctgctcaggaaacatccagctcctcccccatcgaattat
gacattcttgtgaaagcagcaaagtccaaggatttggaaattaagactgattctgcaaag
gctttagccgaatcattagacaaagctgagtctcctgcatccccatatctaaatacactc
ttgcgaattttgaccactcgctgcatgatgcaagctgtgtatttctgttctggaatggat
aacgattttcatcactatggtttagcctcacctatttatacccactttacctcacctatt
agaaggtatgctgacattatagtacatcgacttctggcagtggccataggagccgacagt
acttatccagaacttacagataaacacaaactatcagatctgtgtaaaaatcttaactac
cggcataaaatggctcaatatgcacagagagcatctgttgcattccatacgcagctgttc
ttcaaaaccaaaggagtggtgaatgaagatgcatatatattatttgtaagaaaaaatgca
attgtggttttgattcccaagtatgggttagaaggaacagtcttctttgaagaaaaagat
aaaccaacaccaagacttgattacaacaatgaagtaccgtcacttactgtggaagacaca
acgctacatgtatttgacaaggttaaagtgaacgttatgttagatgattccaacatccag
catcagaaaattcggatggtattggtagaaccaaagataccaggaaatgatgtgcctgca
cagctctctacagcgatgagcagcaacagtgaaccagaaaaaaagaaaaagaagctacaa
caatag
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