Anas acuta (northern pintail): 137854214
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Entry
137854214 CDS
T11380
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137854214 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aacu03019
]
137854214 (HBS1L)
Messenger RNA biogenesis [BR:
aacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
137854214 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137854214
NCBI-ProteinID:
XP_068533457
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Position
3:59097970..59159475
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AA seq
687 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATCAEPLEEEYG
YEGTEDAAGYFASNHQLGDVDRARLNSCLDQMREVLAESVPEQTMVQAVLDSKFDVQKAL
DLVLSQGSKQNVKTHNEDAMIVGKTTKGKSRDSQSARMESEIVPKVTKMTVSGKKQSMGF
EVPCMIAEENGHANTPQKGLLNEDASITSGVIEAVSKSALSPQVAQVSEEQNAVPTPVKK
TSKTKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQ
ESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMIT
GAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQER
FQEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRSQSSDLTKWYTGKCLLEQIDSF
KPPQRSVEKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLH
DEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARILIFNIEVPITKG
FPVLLHYQTVSEPATIRRLLSVLHKSTGEVTKKKPKFLTKGQNALIELQTQRPVALELYK
DFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcaccgcaacgtccgaggatacaactacgacgaagattttgaagacgatgat
gtgtatggccaatcagtagaagatgactattgcatttctccttcaacagccgctcagttt
atctactcaagacgagacaaaccagcaacatgtgctgagccgttagaggaagaatatggc
tacgaaggtacagaagatgctgctggttattttgcatccaatcatcagttgggtgatgtt
gatagagcccgtcttaattcatgccttgatcaaatgagagaagttttggcagagtctgta
ccagaacaaacaatggtgcaagcagtactggatagtaaatttgatgtacagaaggctttg
gatctcgtgctttcccaaggcagtaagcaaaatgtgaagacccacaatgaggatgctatg
attgtaggaaagacgacaaaaggaaaatcaagggattcccagtcagccagaatggaatct
gaaattgtgccaaaagttaccaaaatgacagtgtctggaaagaaacagtctatgggattt
gaagttccatgcatgattgctgaagaaaatggccatgctaacacacctcaaaaaggactg
ctaaatgaagatgctagcataacttctggggtaattgaggcagtctcaaaatctgctctt
tcaccccaagtagcgcaggtttcagaagagcagaatgccgtgcctactccagtaaaaaag
acgagcaagacaaaaccacaaatcgatgtgaaagcagagttggagaagagacaaggagga
aagcaactactaaatttggtggtaataggacatgttgatgcaggtaaaagtactttaatg
ggtcatctactctaccttttgggaaatgtgaacaaaagaactatgcacaaatacgaacag
gaatctaagaaggctggcaaagcttcgtttgcttatgcatgggtcctggatgaaactggg
gaagaaagagaaaggggagtaacaatggatgtgggcatgaccaaatttgagacaaagact
aaagtaattacattgatggatgctccaggccacaaagacttcattccaaatatgatcaca
ggagctgcccaggctgatgtagctattttggttgtggatgccagcagaggagagtttgaa
gctgggtttgagacaggtggacaaactcgagaacatggattattagtgcgttctcttgga
gtgacacagctggctgttgctgtcaataaaatggaccaggtcaattggcagcaagaaaga
tttcaggaaattaccagtaagcttggccaatttcttaaacaagctggctttaaggaatct
gatgtggcttatattccaacgagtggtcttggtggtgaaaatctagtgacaagaagtcag
tcaagtgaccttacgaaatggtatacaggaaagtgtttgttagagcaaattgattctttc
aagccaccacaaagatcagtagagaaaccatttaggttgtgtgttgctgacgtttttaaa
gaccaaggatcaggattttgtgtgactggaaaaatagaagcaggctatattcaagttgga
gaacgacttctggcaatgcctcctaatgaaacttgcactgcaaaaggaatcacactgcat
gatgaaccagttgattgggctgcagcaggagatcacgttagtctcactttgaccggcatg
gatatcatcaaaatcaatgttggctgtgtattttgtgatcccaaggagcccattaaagtt
tgcactcgattcagagctcggattctcatttttaatattgaggttccaatcactaaagga
ttccctgtgcttttacactatcaaaccgtaagtgaacctgctactattagaagattattg
agtgtcctgcacaaaagcactggtgaagtgacaaagaaaaagcctaagttcctgaccaaa
ggccagaatgctttaatagaactacagactcaaagacctgttgctctagagttgtataaa
gattttaaagagcttgggaggtttatgttacgctacagtggttcaactattgctgcagga
gttgtcacagagattaaagaatga
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