Anas acuta (northern pintail): 137854703
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Entry
137854703 CDS
T11380
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu04382
Cornified envelope formation
aacu04510
Focal adhesion
aacu04512
ECM-receptor interaction
aacu04518
Integrin signaling
aacu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137854703 (COL4A2)
04518 Integrin signaling
137854703 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137854703 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137854703 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
137854703 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aacu04147
]
137854703 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
aacu00536
]
137854703 (COL4A2)
Exosome [BR:
aacu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
137854703 (COL4A2)
Glycosaminoglycan binding proteins [BR:
aacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137854703 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
137854703
NCBI-ProteinID:
XP_068534592
LinkDB
All DBs
Position
1:complement(60615997..60764215)
Genome browser
AA seq
1743 aa
AA seq
DB search
MDIAQLPSAGGLVRPDLGVALVLLEVVLSAVRVVAEWPPKPCVRCTEPSAVSVDAVRPPK
RRPRGAKTYTGPCGGRDCSGGCQCFPEKGGRGQPGLLGSQGFPGPPGLMGIPGVQGPKGH
KGERGHPGISGPKGEMGLRGVTGFPGADGVPGHPGQPGSRGKPGHDGCNGTVGDPGDSGT
PGFSGFPGTIGVQGPKGQKGEPYILPPDIASQYRGEPGDPGFSGFPGPPGILGIQGPIGP
RGQRGRPGPPGPPGPQGPQGNRGLGFYGEKGEQGPPGPPGPPGLPTKELTGVPSDKHKGE
RGERGQKGEPGQPGIQYAGERGEKGVTGFAGQRGLPGIDGSPGLIGERGFSGPDGLPGGY
GPRGAKGEQGEMGPPGQPVYIPYHIPRKGTRGEPGFPGASGLQGEPGEQGDRGLPGLPGF
SDGDGDKPGLPGEMGPKGEKGELGSPAYQSGPPGLPGRHGEPGQRGPPGPAGTPGSLFGL
KGREGTPGRPGTQGYPGPRGQKGPKGEEGDCSKCLLGEELRRGSTGPPGPPGFPGTPGQP
GRKGEPGDQGQHGIPGYPGAKGSSGQDGFPGPKGQKGDSFYITTKGTKGIRGDPGLPGIR
GGDGFPGRDGLDGLPGQPGLPGDTIKGHPGDPGYPGELGPKGFPGETGLPGEGFVGPKGY
RGPPGDHGTDGSPGPPGLPGPPGEPGQLDCGQVIEDFSRGDGTEPIWSGGGCVRPPKGSQ
GKPGLPGATGAKGARGFPGDPGPVGYPGLNGTRGDPGWEGLPGPPGFTGPRGDRGLNGLP
GLQGHPGLTGKPGAPGLTGQKGVPGEVLRATAGSRGDAGLPGFPGLKGAPGDQGVPGVRG
ADGSPGLPGAKGDPGLQGLPGLMGLPGSPGTHGFPGPPGNPGPDGGPGSQGPLGPPGARG
EDGEQGFPGPVGLKGLSGDKGETGHPGLQGIPGVMGPPGISGMDGFPGDKGLKGSPGIDG
FKGMPGLKGRPGIKGSKGEFGSFGARGDKGAQGARGFKGDRGEQGPPGEPPKLKPSMMME
VKGEKGDVGETGTKGFFGLKGSKGMPGLPGKTGTPGSPGHPSYVAGVKGDIGAKGTTGVK
GYPGPAGSPGIRGFPGSTGGRGDKGAPGISGHFGTPGSHGEIGEPGDTINLPGMPGLKGE
IGVPGLTGLRGGPGQKGEGGDPGIPGIEGIKGIQGVPGSLGQEGLPGLVGPPGQQGSPGT
PGFQGEKGTPGWPGLPGQAGLPGLRGISGLHGLPGTKGLPGSPGPDGYGSAGFPGTVGDK
GEAGEPSRVEGSRGPPGQKGDRGVPGIQGTFGIPGQDGFPGPPGISNISGYPGDKGSPGL
DGVPGYPGLQGQPGVPAPPGSKGESGQAGVSGQPGPKGDRGDPGLAGRPGIPGYPGPKGR
KGEQGVIGFMGTVGFPGDLGPIGPKGDRGLTGFQGPPGSPGLPPVPPRLIAEQGSPGPRG
NAGPPGSPGDMGPQGPPGDPGFRGSPGDPGLQGRGGIPAPPGSRGEQGAMGFQGPVGFEG
QPGRPGSPGLPGMPGRSVSIGYLLVKHSQSDQEPMCPIGMNKLWSGYSLLYFEGQEKAHN
QDLGLAGSCLARFSTMPFLYCNPGDICYYASRNDKSYWLSTTAPLPMMPVAEEEIKPYIS
RCSVCEAPAVAIAVHSQEASIPRCPDGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLE
DFRATPFIECNGARGTCHYFANKYSFWLTTIDQPFQSKPSADTLKAGLIRSHISRCQVCM
KNL
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgcgcagcttcccagcgccggtggtttggttcgtccggatctgggggtcgcg
ctggtcctgctggaggtggtgctgtcagccgtcagagtagttgctgaatggccaccaaaa
ccctgtgtaaggtgcacggagccgtcagccgtcagcgtagatgctgtaaggccaccaaaa
cgccgtccgaggggtgcaaagacttacacaggaccatgtggaggaagagactgcagtgga
ggatgccagtgttttcctgaaaaaggaggccgtggccagccaggactccttggatcacag
gggttccctggaccaccaggattgatggggatcccaggagtgcaaggtcccaaaggtcac
aaaggtgaaagaggacatccaggaataagtggacccaaaggagaaatggggctaagagga
gtcactggattcccaggggcagatggcgttcctggtcatccagggcagccaggatcaagg
gggaaaccgggtcatgatggctgtaacgggacagtaggtgaccctggagactcaggaact
cctggattctctggtttccctggtaccattggagtccaaggaccaaagggccagaagggg
gagccatatatactaccaccggacattgccagccaataccggggagaacctggggatcca
ggattcagtggttttccaggacctccaggtatactgggtattcaaggacctattggtcca
agaggacaacgaggaagaccaggaccaccagggcccccaggaccacaagggccacaaggc
aacaggggccttggcttctatggagaaaaaggcgaacagggaccaccaggtccaccaggt
ccacccgggcttcctacaaaagaactgacgggtgtcccctctgacaaacacaagggtgaa
agaggagaacgagggcaaaaaggggaacctggacaaccaggtatacaatacgctggtgaa
agaggtgaaaaaggggtaacgggcttcgcaggacaaaggggactacctggtatcgatggc
tctccaggactcattggagaaagaggtttttcaggacctgatggcctaccaggtggatac
ggtcctagaggtgccaagggagagcagggcgagatgggtcctcctggacaacctgtctat
attccgtaccacattccaagaaaaggtacaagaggtgaaccaggctttccaggtgcttct
ggactacagggagaaccaggagagcaaggagatcgtgggctgcctggtcttcctggattc
tctgatggagatggggataagccaggcttacctggagaaatgggaccaaaaggtgaaaaa
ggtgaattaggatctcctgcttatcagtcaggcccacctgggttgccgggtaggcacggt
gaaccagggcagcgtggtcctcctggtcctgctggaactcccggttctctctttggacta
aaaggacgggaagggacaccaggtagacctggcacacaaggttaccctgggccaagagga
caaaaaggacccaaaggtgaagaaggggattgcagtaaatgccttctgggtgaagaactc
agaaggggctccactggcccccctggcccacctggttttccaggaacccctggccagcca
gggagaaaaggagaacctggtgatcaaggtcaacatggtattcctggctaccctggagca
aaaggatcgtcgggtcaagatggatttccaggaccaaaaggacaaaagggagactctttt
tacataactactaaaggcaccaaaggaatccgaggagaccctgggcttcctggtatcaga
gggggagatggttttccaggcagagatggattagatggtttaccaggacagcctggcctt
ccgggtgatactatcaagggccacccaggcgatcctggttatccaggcgaattaggccca
aagggctttccaggggaaacgggtcttccaggtgaaggatttgttggtccaaaagggtac
cgtggtcctccaggtgaccatggaacagatggaagccctggacctccaggtctgcccggt
ccaccaggagagcctggccaactagactgtgggcaggtcattgaagacttttctagagga
gacggaactgaaccaatatggtcaggtgggggctgtgtaagaccaccaaaggggtcccaa
ggcaagccaggactgccaggagccacaggagctaaaggtgcaagaggattcccaggtgat
cctggcccagtgggatacccagggctcaatggtacacgaggtgatccaggttgggaagga
ttgccaggtcctccaggttttactgggcctcggggagacaggggcctaaatggactacct
ggactacaaggacacccaggccttacaggaaagcctggtgctccaggactgacaggacag
aagggtgttcctggtgaagttttgagagcaacagcaggttctcgaggtgatgctgggctg
cctggcttccctggtttgaaaggcgcacctggagatcaaggagtaccaggagttagagga
gcggatggtagcccaggtttgccaggagccaaaggcgatccagggctgcagggtctccct
ggtctgatgggtttgccaggatcaccaggaacacacggattcccaggcccaccagggaat
cccgggccagacggaggacctgggtctcaaggaccccttggtccaccaggtgcaagggga
gaagatggtgagcaaggttttcctggtcccgtgggcctgaaaggtctgtctggtgacaaa
ggtgaaacggggcacccaggattgcaaggtatacctggcgtgatgggtccccctggcatc
agtggaatggatggctttccaggagataaaggtctaaaaggttcacctggcattgatggt
ttcaaaggcatgccaggcctgaaaggaagaccaggaatcaaaggaagcaaaggagaattt
ggttcattcggggctcggggtgataaaggcgcacagggcgcacgaggctttaaaggtgac
cgtggggaacagggtcccccaggagagcccccgaagcttaagcctagcatgatgatggaa
gttaaaggtgaaaaaggagatgttggagaaaccggcaccaagggattctttggcttgaaa
ggtagcaagggaatgccaggcctccccggtaagacaggaactcccgggtctccggggcac
cccagttacgtggctggtgtgaagggggacattggtgcgaaaggaacgacaggtgtgaaa
gggtatcctggtcctgctggctctcctggcatcagaggcttccctggcagcacaggaggc
aggggagataagggtgccccgggaatttcaggccattttggtactcctggctcccatggt
gaaataggtgagccgggagatactataaacttaccaggaatgcccggtcttaaaggggaa
atcggtgtgccaggcctaacaggcttaagaggaggcccaggacaaaaaggtgaagggggt
gaccctggtatccctggcattgagggcatcaagggcatacagggtgtccctggctccttg
ggacaagaaggtttgccaggactggttggccccccagggcagcaaggaagccctgggaca
cctggatttcaaggtgaaaagggaactcccggctggcctggcttacctggacaagcaggc
ttgcctggcttgagaggaatcagtggactgcacggcttaccgggcactaaggggctgcca
ggatcaccaggtccggatggctacggctctgcaggtttcccaggcaccgtgggtgacaaa
ggagaagcaggagagccaagcagagtggaaggtagccgaggccctccaggtcagaaggga
gacagaggtgttccagggatccaaggaacctttggcattcctgggcaggatggatttcca
gggcctcccgggatttcaaatatatcaggatatcctggtgataaaggttccccaggtctg
gacggagtgccaggctatccaggactacaggggcagcctggagtaccagctccacctgga
agcaaaggagaaagtgggcaagcaggtgtgagtggacaacctggcccaaaaggagataga
ggtgatcctggattagcagggagacctggaattcccgggtaccctggaccaaaaggtcgc
aagggtgagcaaggtgtcatcggctttatgggcacagtaggatttccaggtgatctggga
cccatcggacccaagggggacagaggactaactggctttcagggccctccaggctctcct
gggctgccgcctgttcctccaaggctgattgctgagcaaggatcaccaggtccccgtgga
aatgcaggacctccgggaagcccaggagatatgggccctcagggtccaccaggcgatcca
ggtttcagaggctcacctggagacccagggctccagggcagaggtggcattccagctcct
cctggatccagaggtgaacaaggagcaatggggtttcaaggtccagtgggatttgaaggc
cagccaggccgccctggtagccctgggctgccaggcatgccgggtcgcagcgtcagcatc
ggctacctgctggtgaagcacagccagtccgaccaagagcccatgtgtcccatcggcatg
aacaaactctggagtgggtacagcctcctgtacttcgaaggacaagagaaagcacacaac
caggacctagggctggccggctcatgcttggctcgtttcagtacgatgccattcctctac
tgtaaccccggggatatttgttactatgcaagtcgaaatgataaatcctactggctctcg
actacagcacctctcccaatgatgcctgtggcagaagaagaaattaagccatatatcagc
cgctgctcagtctgtgaggccccagctgtggcgattgctgtccatagccaagaagcttct
attcctcgctgccctgacggctggcgcagtttgtggattggatattccttcctcatgcac
actgcagctggtgatgaaggtggaggacagtcgctggtttctcctgggagctgcctggaa
gatttcagagctactcctttcatcgaatgcaacggcgcacgtggaacctgtcattacttt
gcaaataaatacagcttctggctcactacgattgaccaacccttccaaagcaagccctca
gcagatacactcaaggcaggactcatccgaagccatatcagcagatgccaagtctgtatg
aaaaatttatag
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