Anas acuta (northern pintail): 137855655
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Entry
137855655 CDS
T11380
Symbol
DHX15
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137855655 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aacu03041
]
137855655 (DHX15)
03009 Ribosome biogenesis [BR:
aacu03009
]
137855655 (DHX15)
Enzymes [BR:
aacu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137855655 (DHX15)
Spliceosome [BR:
aacu03041
]
Complex A
U2 snRNP components
U2 related factors
137855655 (DHX15)
Complex B
137855655 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
137855655 (DHX15)
Ribosome biogenesis [BR:
aacu03009
]
Eukaryotic type
90S particles
Helicases
137855655 (DHX15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
Atrophin-1
SRP54
nSTAND3
Cas3-like_C_2
AAA_29
Flavi_DEAD
AAA_25
Apis_Csd
Motif
Other DBs
NCBI-GeneID:
137855655
NCBI-ProteinID:
XP_068536137
LinkDB
All DBs
Position
4
Genome browser
AA seq
762 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSDGKDRDRDRDRDDRKDRDRDRDRDRDRDREREKEKELRAA
SNSTLIAAGLPPMKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILIRH
QSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVML
GQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM
GVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLE
AAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLP
PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV
ESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQ
LKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAK
MVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHA
FKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKAL
VTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDI
KPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccgcctagacctcggggacgactacagctccagcaagaagcgctcc
gatgggaaagatcgtgaccgggacagagaccgcgatgaccggaaagatcgtgacagggat
cgtgacagagatagagatcgtgacagagaaagggagaaggaaaaggaattgcgagcagca
tctaactctacgctcattgctgctgggttaccacctatgaaaccagcaatgattccacac
agtattaaccctttcacaaatcttccacatacacctcgttactatgacatactgaaaaag
cggctacagcttcctgtctgggaatataaagaaagatttacagatattttgattaggcat
cagtcatttgtactggttggagagactgggtctggtaaaacaacacagatcccccagtgg
tgtgttgactacatgcgctcgttacctggaccaaagaggggagtagcatgtacccagcct
aggagagtggctgcaatgagcgtggcgcagcgtgttgctgatgagatggatgtaatgctg
ggccaggaagttggttactctattcgatttgaagactgcagtagtgcaaaaaccattctg
aagtatatgactgatggtatgttacttcgtgaagcaatgaatgatcctttgctggagcgc
tatggtgttataattcttgacgaggctcatgagagaaccctggctactgatatcttgatg
ggagttctgaaagaagttgtaagacaaagagctgatttgaaggttatagttatgagtgcc
actttagatgctggcaagtttcagatctactttgataactgccctcttctaaccatcccg
ggtcgcacccatcctgtggagatattctatactccagaaccagaaagggattacctggag
gctgccattcgaacagtgatccaaattcacatgtgtgaagaagaggaaggagatcttcta
ctctttcttactggacaggaggagatcgatgaagcctgcaagaggataaaacgtgaaatt
gatgatttaggtcctgaagtgggtgacatcaaaatcattccattgtactccacccttcct
ccgcagcaacagcaaaggatttttgaacctcctccaccaaaaaaacagaatggagcaata
ggaagaaaggttgttgtatccaccaacattgccgagacatcattaacaatagatggtgtg
gtgtttgtgattgatcctggctttgcaaaacaaaaggtgtacaatccccgtatcagagtg
gagtctctcttggtgactgcgattagtaaagcttcagctcagcagagagctggccgtgct
ggtcgtactagaccaggcaagtgcttcaggctttatacagagaaggcttacaaaactgaa
atgcaggacaatacatacccggaaattttgaggtctaacttaggatctgtagtattgcag
ctcaagaagcttggtatagatgatttggtgcacttcgattttatggatcctccagctcct
gaaactctgatgagagccttagagctcttgaattatctggctgctttaaatgatgatgga
gacttgactgaattgggatccatgatggctgaatttccactggacccacagctggcaaaa
atggttattgcaagttgtgactacaactgctctaatgaggtcctatctattactgccatg
ttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagcagcagatgaagcc
aagatgaggtttgcccacatagatggagatcatttgacgttgctgaatgtctaccatgct
ttcaaacaaaatcatgagtcggttcagtggtgttatgacaacttcattaactacaggtcc
ctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggatagatttaatttg
cctcgtagaagcacagactttaccagccgagattattacatcaatataagaaaggcatta
gttactgggtatttcatgcaggtggcgcacttggagcgaacagggcattacctaacagtg
aaagacaaccaagtggtgcagctgcatccttccactgtccttgaccataaaccagagtgg
gtgctttataatgagtttgtccttacaacgaagaactacatccggacatgtacagacatc
aagccggagtggctggtgaaaattgcccctcaatattatgacatgagcaattttccacag
tgtgaagcaaagagacagttggatcgcatcattgccaaacttcagtccaaggaatactca
cagtactga
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