Anas acuta (northern pintail): 137855704
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Entry
137855704 CDS
T11380
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu03030
DNA replication
aacu03410
Base excision repair
aacu03420
Nucleotide excision repair
aacu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137855704 (RFC1)
03410 Base excision repair
137855704 (RFC1)
03420 Nucleotide excision repair
137855704 (RFC1)
03430 Mismatch repair
137855704 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aacu03032
]
137855704 (RFC1)
03400 DNA repair and recombination proteins [BR:
aacu03400
]
137855704 (RFC1)
DNA replication proteins [BR:
aacu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
137855704 (RFC1)
DNA repair and recombination proteins [BR:
aacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
137855704 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_14
Rad17
AAA_22
BRCT_2
AAA_5
AAA_30
RNA_helicase
AAA_16
AAA_17
RuvB_N
TIP49
nSTAND3
AAA_18
AAA_33
AAA_7
AAA_19
NTPase_1
Motif
Other DBs
NCBI-GeneID:
137855704
NCBI-ProteinID:
XP_068536220
LinkDB
All DBs
Position
4:complement(23769917..23811628)
Genome browser
AA seq
1156 aa
AA seq
DB search
MAATPGGSGTTKDIRKFFGVVPPGKRQECENVKKSDKIKNGEGDSSGKKRGKETKVKNSP
SEDIPKQKQTNKKKRIIYDSDSEEEVQSVKKSKKPSEKKAATSKLGKVLKQHPVVYVSET
DDDDDFVNKRISLKPKENGASAISCPGSTTVKKEDVKPRAKPKPLSPVKLTPTSALDYFG
TSSVQRSEKKLVASKRKEPSQSRDSTVDDEAIARQLQLEEDSELERQLHEDEEFAKTLAM
LDETPQKKKARRDSEEQTVLSIKSSPNVTEGYKQSQRVKATNSAGEAKQTKSENSKGSHL
PPQSTDSKLAEKSTDKTLPLKPTSKLVALKRKEEIAEKERGTQSSVSKEKPLGKEEKKTP
KKEKISPKKAESVSPEDSEKKRNNYQAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVI
TGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDCGQSKCEKASALGTKIIDEDG
LFDLVRTMPGKKSKYELAAESEAKKTESRHKKTPQKTEAGKKSFSPLKREADIKKRNSTP
EKGATFKSVKKETAAIRKLTDFKQQAVEKKEVPEPKGNLVSESNENGTERLLWVDKYKPT
SLKAIIGQQGEQSCANKLLRWLRNWHKNTSEDGQAKASKLGGKDDGISSKAALLSGPPGV
GKTTTAALVCKELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGTSSSVSGKHV
LIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPR
LEQIKGAMMSIAFKEGLKIPPPAMHEIILAANQDIRQVLHNLNMWCAKDKSLTYDEAKTD
ASRAKKDIKLGPFDVVRKVFAAGEEASRMSLIDKSDLFFHDYSLAPLFVQENYVHVKPAA
AGGDLKKHLMLLSRAADSICDGDLVDRQIRSKQNWNLLPTQAIYSSVLPGELMRGYMSQF
PVFPSWLGKFSSTGKHERIVQELAMHMSLRTQMCKRTVNMEYLSYLRDALVQPLKDFGAD
GVQQAITFMDSYCLMKEDVENIMEISMWGGKPSPFSKLDSKVKAAFTRAYNKEAHLTPYS
LNSVKTSKRQSASMATSELSEDLNVDETQSDEDEQDSVESDAMIKQKKAKSSKLPKREKN
DEPTKKEGKRKEKTRH
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggcagctacccctggaggtagtggtactacaaaggatatccggaaattctttggcgtt
gtaccccctgggaagcgacaagaatgcgagaatgtgaaaaagagtgacaaaataaaaaat
ggggaaggagactcaagtgggaaaaagaggggaaaagagactaaggtgaagaattcaccc
agtgaagatattcccaaacaaaagcagacaaacaagaaaaaaagaataatctatgattca
gattcagaagaggaggtgcagtcagtgaaaaagtccaagaagccatcagagaaaaaagca
gccacttcaaaacttggtaaagttctaaagcagcatcctgttgtttatgtttcagagaca
gatgatgatgatgactttgtcaataagagaatttccctgaaaccaaaggagaatggggca
tcagccatcagttgcccaggatcaacgacggtgaaaaaggaagatgtaaaaccacgagct
aaacccaagccattatctccagtgaagctgactcccacctcagctctcgattactttggg
acaagtagcgtccagcgatcagaaaagaaactggtagcaagtaaaaggaaggaaccctca
caaagcagggacagcacagtggacgatgaagccattgctaggcaactgcagcttgaagaa
gattcagagctggagagacagttgcatgaagatgaagaatttgctaagactttggccatg
ttggatgaaacaccacagaagaagaaggctcggagggattcagaagagcagacagtactg
agcatcaagagcagtcctaatgtgacagagggatacaagcaatctcagagagtgaaagca
acaaactctgcaggtgaagcaaaacaaactaaatctgaaaactcaaaagggtcccattta
cccccacaatcaactgatagtaaactagcagaaaagtcaactgataagaccttgcctttg
aagcctacctctaagcttgtggctctgaaacgaaaagaagagattgctgaaaaggaaaga
ggcactcaaagttcagtatcaaaagaaaaacctctgggaaaagaagagaagaaaacacca
aagaaggagaaaatttctccaaagaaggctgagtctgtaagtcctgaggactctgaaaag
aagcgaaacaattatcaagcctaccgaagcttccttaatcgcgagggtccaaaagccctg
ggttccaaagagatacctcaaggagctgaaaactgcttggaaggcctgacattcgtaatt
acaggagttctggagtctattgaaagagatgaggccaaatctctgattgaacgttatgga
ggaaaagtaactgggaatgtcagcaagaagactaactacctggttatgggacgagactgt
ggccaatctaaatgtgaaaaggcatctgctttagggacaaaaattattgatgaagatggc
ctatttgatcttgttcgaactatgccaggcaagaagtccaaatacgagctggcagctgaa
tcagaggccaagaaaacagagtcgagacataaaaagacaccacaaaaaactgaagctggc
aaaaagagttttagccccctcaaaagggaagctgatattaaaaaaagaaattctactcct
gagaagggagctaccttcaaatctgttaagaaagaaactgctgccattcgaaagcttaca
gactttaaacagcaagcagtggagaagaaagaagtcccagaacctaaggggaacttggtc
tctgagagtaatgaaaacggaacagagagattgctatgggtggataaatacaagcccaca
tctctcaaggcaatcattggacagcagggtgagcaaagctgtgccaacaaacttctccga
tggctccgaaactggcacaagaatacctcggaagatggacaagcaaaggccagcaaactt
ggaggcaaagatgatggtattagctctaaagcagcattactttctggtccacctggagtt
ggtaaaaccactacagctgctttagtttgtaaggaactggggtatagctacgtggagctg
aatgccagtgacactcggagtaagaacagtctaaaggaagtagttgctgaatcgcttaac
aacaccagcatcaaagacttctgttctggcacatcctcatcagttagcgggaaacatgta
ttgatcatggatgaagtggatggtatggcaggcaatgaagacagaggagggattcaggag
ttgatcggtttgattaaacacacaaaaatacccatcatctgcatgtgtaatgatcgaaac
catcctaaaattcgttccttggtccactactgttttgatcttcgttttcagagacctcgt
ctagagcagattaagggtgccatgatgtctattgcgtttaaagaaggcttaaaaattcca
ccacctgctatgcatgagataatcctggcagcaaatcaagacatcagacaggttttacat
aatcttaatatgtggtgtgcaaaagataaatcattgacttatgatgaagccaaaacagat
gccagcagagctaagaaggatatcaaactgggcccttttgacgttgtccggaaggttttt
gctgctggagaggaggcttcccgtatgtctctcatagacaaatctgaccttttcttccat
gactattccctagcacctctttttgtccaagagaactatgtacatgtgaaaccagcagct
gctgggggagatctgaaaaagcacttgatgctcttgagtagagcagctgatagtatatgt
gacggtgatctagtggacagacagattcgtagcaagcaaaactggaaccttctaccaaca
caggctatttattcgagtgttctccccggggagctgatgagaggttacatgtcccagttt
cctgtctttcccagctggctggggaaattttcatcaacaggcaaacatgaacgtatcgtc
caagaactggcaatgcacatgagtctcagaacccagatgtgcaagaggacagtaaacatg
gagtacctgtcttatctgcgggatgcacttgtccagcctttgaaagactttggagcagat
ggtgtacaacaagctataaccttcatggactcttactgcctgatgaaagaagatgttgaa
aatatcatggaaataagcatgtggggaggcaaacccagtcctttttcaaagctggattcc
aaggtcaaagccgcttttacgcgtgcctacaacaaagaggcacatctgactccgtattcc
ctgaattctgtgaagacatctaaaaggcagtcagcatccatggcaacctctgaactgagt
gaggacctgaatgtggatgagacccagtctgatgaggatgagcaagacagcgttgaaagc
gatgcaatgattaagcaaaagaaggcgaagtcttccaagctgccaaaaagagagaaaaac
gatgaaccaacaaaaaaagaagggaaaaggaaggagaaaacaagacattaa
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integrated database retrieval system
