Anas acuta (northern pintail): 137855899 Help Entry 137855899         CDS       T11380                                  Symbol SYNPO2 Name (RefSeq) synaptopodin-2 isoform X1   KO K24066   synaptopodin-2 Organism aacu  Anas acuta (northern pintail) Pathway aacu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:aacu00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     137855899 (SYNPO2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:aacu04990]     137855899 (SYNPO2) Domain-containing proteins not elsewhere classified [BR:aacu04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    137855899 (SYNPO2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 Calsarcin PDZ_2 Pept_S41_N_bact Motif Other DBs NCBI-GeneID:  137855899 NCBI-ProteinID:  XP_068536685 LinkDB All DBs Position 4:32188255..32280442 Genome browser AA seq 1274 aa AA seqDB search MLPNCTRKMGTGDYICIAMTGGAPWGFRLQGGKEQKQPLQIAKVRSKSKAAKAGLCEGDE VVSINGKPCGDLTYAEVIVLMESLTDVLQMLIKRSSSGINEALSAERENGKHDNIKNEDY KESATLQINTAKEIPHGDLCITEIYSETHQAAGESNIHFSEMKQQTTQSHRIAPKVIGTS KVLVTDESALREKREERRPGTMVELQLSLSNDGHKSTNAPAVTVLGAEKRAPSGKGPTVQ EDGTNPVIAIPLGVKESNIQWSSKVVQFSSGKEVKRIQGAAPSIPRVEVILDCSDREKEA PRSLAERGCVDSQVEGGQSEAPPSLLSFAISPEGTEQGEDNQHSERDHRPLKHRARHARL RRSESLSEKQVKEAKSKCKSIALLLTAAPNPNSKGVLMFKKRRQRARKYTLVSYGTGELE RDEDEGEEGEGEEGDKENTFEVSLLATSESEIDEDFFSDIDNDGKIVTFDWDSSLPEVEK KTKSGDEMQTLPESTGKGALMFAKRRQRMDQITAEQEEMKARTVHAEEQREVTMSENFQK VSSSAYQTKEEDMSRQQTCISKSYTDVSQNHGKIVQQNGFGLAPDTNLSFQSSDAQKAAS LNRTAKPFPSGVQNRAAAPFSPTRNVISPLSDLPAPPPYCSVSPPPENFYRPVSAPATSK TAPTVWSLTEPTERIASRDERIAVPAKRTGILQEAKRRSTSKPMFSFKEAPKVNPNPALL SLVHNTEGKKGTGAGFESGPEEDYLSLGAEACNFMQSQASKQKTPPPIAPKPSVKVSPSA GTPVSPVWSPAAAAANKAPSFPAPASPQAAYPAPLKSPQYPHSPSANPPNTLNLTGPFKG PQATLASPNHTPKTPVTPSAGETKTPFEMPPAMSGKGAQLFARRHSRMEKYVVDSETVQA NMARASSPTPSLPASWKYSSNVRAPPPVAYNPIHSPSYPLAATKPSSKSAAATKNTKRKP KKGLNALDIMKHQPYQLDASLFTFQPPSTKESLAIKQTSKLPTSKQALSLRPPGASSPTN ARASSVYSVPAYSTQPSYQSNASTPVNESYSSTGYSAFSKPETTTSSLFTAPRPKFSAKK VGVTAQERSSGRSLSLPGRPSAFISRAMSPTSPLIFQPAPDYFSKPDTAADRPGKRPTPW EAAAKSPLGLVDEAFGPQSMQEYIAANIVSAARRKTLPEPPDEWKQKVSYEPPAPSGSVA LLGGKQSGILSPRKSSLSVPNATMQGGSQLQYAYCSQRSRTDPDIMSMESRSDYGVSTAD SNYNPQPRGWRRPT NT seq 3825 nt NT seq  +upstreamnt  +downstreamnt atgctgcctaactgcaccaggaaaatgggcacaggggattacatctgcattgctatgact ggaggggcgccttggggctttagattgcaaggtggcaaggagcaaaagcagcctttgcaa atcgccaaggtccgcagcaaaagcaaagcagctaaagctggcctttgtgagggggatgag gtggtgtctatcaatggcaaaccctgtggagacttaacctatgctgaagttatcgttctg atggaaagcttgactgacgtcctgcagatgcttatcaagagatcctccagtggaataaat gaagctttgagtgctgaaagagaaaatggaaagcatgataacataaaaaatgaggactat aaggagagcgctacactgcagattaatacagccaaagaaataccccatggagacttatgc atcacagagatatacagtgagactcaccaggcagcaggagaaagcaacatacacttttct gaaatgaaacaacagaccacacaaagccacagaattgctcctaaagtgataggcacctcc aaagtgcttgtgacagatgagtctgctctcagagagaagagagaagaaagaaggccaggc actatggttgagttgcagttgtccctctcaaatgatggtcacaagagcaccaatgctcct gctgtgactgtcctaggggcagaaaaacgcgccccttcagggaaaggacccactgtacaa gaagatggaactaaccccgtaatcgcaattcccctgggtgtgaaagagagcaacatccag tggtcaagcaaagtagtccaattttctagtggcaaagaggtcaagaggatccaaggtgca gctccatctatccccagggtggaggtgatcctagactgttcagacagggagaaggaagca cccaggtctctagctgaaagggggtgtgttgattctcaagtggaaggagggcagtcagaa gcacctccttccctcctctcctttgcaatctcaccagaaggcacagagcagggagaagac aaccagcactcggaaagggatcacagacctctcaagcacagggcgaggcacgcaagactc cggcgaagtgagagcctgtcagagaagcaggtcaaagaagccaaatctaaatgtaaaagt attgcattgctgctgacagcagctcccaatcccaattccaagggggtgttgatgttcaag aagcgtcgccaaagggcaaggaaatatactttagtgagctacggtactggggagctagaa cgtgacgaagacgagggtgaagaaggtgaaggtgaagagggggacaaagaaaacactttt gaagtgagtttgcttgcaacgagtgagtcagaaatagatgaagatttcttctctgacatt gacaacgacggcaagattgtgacatttgactgggacagcagtctacctgaggtggaaaag aagacaaaaagtggagacgagatgcagacgcttccagagagcacaggtaaaggggccctc atgtttgccaagagacggcagagaatggatcagatcacagctgagcaagaggagatgaag gcacgcacagtgcatgcagaggagcaaagggaagtcaccatgtcagagaacttccagaaa gtaagctcttcagcctaccaaacaaaagaggaagacatgtcaagacagcagacctgcata agcaaaagttacacagacgtgagccagaatcatggtaaaattgtacaacaaaatgggttt ggcttagcaccagacacaaacctctcttttcaatcctctgatgctcaaaaagcagcatct ttgaatagaacagcaaaacccttcccttctggggttcaaaaccgagcagcagcaccattt tcacccacaagaaatgtcattagtcctctttcagatctaccagcacccccgccctactgc tctgttagcccaccgcctgagaatttttacagacctgtatcagctcctgcaacaagcaaa actgcgccaaccgtgtggtcactcacagagccaactgaacgcattgcatccagagatgaa aggattgctgtgccagccaaaagaactgggatattgcaagaggcaaagagaagaagcaca tcaaaacctatgttctctttcaaagaagcacccaaagtaaatcctaatcctgccctgttg tcccttgtacacaacacagaaggcaaaaagggtactggagctggttttgagtcaggacct gaagaagactacctcagtttgggagcagaagcttgcaatttcatgcagagtcaagcatct aaacaaaagacccctcctcctattgctccaaagccttcagtcaaggtttctccttccgct ggtaccccagtttcacccgtgtggtcacctgcagctgcggctgctaacaaggctccttct ttcccagctccagcatcacctcaggcagcgtaccctgcaccactcaaatccccacagtat cctcattctccttctgccaatcccccaaatactctcaacttaactggtcctttcaaaggg cctcaggcaacgctagcgagtccaaaccacacacccaagacaccagtcacaccaagtgct ggagaaacaaagacaccctttgagatgccaccagctatgagtggaaaaggagcacaatta tttgccagaaggcactctcgaatggagaaatatgtggtcgattcagagactgtgcaagca aacatggcacgagcctcatctccaactccatctttaccagcttcttggaaatattcatct aatgtccgagcacctccacctgtagcttacaatcccatccacagcccatcttatcctctt gctgctaccaaaccttcctctaagtctgctgctgctaccaaaaataccaaaagaaaaccc aagaaaggtctcaatgctttggatattatgaaacatcagccttatcaacttgatgcgtct ttatttacttttcaacctccaagtactaaggaaagcctagctattaagcagacgtcaaag ctgcctacttcaaagcaagctctgtctttacgaccacctggtgctagctctcctactaat gctcgggcatcttcagtgtactccgtgccagcctacagcacgcagccttcataccagtca aacgcctctaccccagtaaatgagtcctattcatctacaggctactctgcattttctaag ccggaaacaaccacttcctctttgtttactgctccgaggccaaaattttcagcaaagaaa gttggcgtcactgcacaggaaagaagcagtggacgctcattatcacttcctgggagacct tctgcattcatttctcgagccatgtctcctacttctcctcttatatttcagcctgcccct gactacttcagcaaaccagatacagcagctgacaggcctggcaagagaccgactccctgg gaagcagcagcaaaatcccctcttggcctagtggatgaagcttttgggccccaaagtatg caggaatacattgcggctaacatagtatcagctgctcgcaggaaaacacttcctgagcca ccagatgaatggaaacaaaaagtttcttatgagcctccagccccaagtggtagcgtagcc ttattaggagggaagcagtcgggtattttatcaccccgaaaaagctccctgtctgtcccg aatgccaccatgcaggggggctctcagttgcagtatgcttactgcagccaacggtcccga acagatcctgatataatgtccatggagtccaggtctgactatggtgtatcaacagctgat tcaaactacaatccacagccaaggggatggaggcgtccaacatga

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