Anas acuta (northern pintail): 137856149
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Entry
137856149 CDS
T11380
Symbol
DDX60
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60 isoform X1
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
aacu Anas acuta (northern pintail)
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aacu03019
]
137856149 (DDX60)
Enzymes [BR:
aacu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137856149 (DDX60)
Messenger RNA biogenesis [BR:
aacu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
137856149 (DDX60)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137856149
NCBI-ProteinID:
XP_068537281
LinkDB
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Position
4:complement(50006565..50054129)
Genome browser
AA seq
1827 aa
AA seq
DB search
MDSAEDNFKKVVRDTTNGSTSKDDSDDMDSDFIDSEEIGCISTKKNKEGGSTSDHDEGDE
TSDKAEAAVVQMLKEKEDKEKEVEDPDYGKAYNILTTEEVAQKESQTEGKDFRVLQNEWD
SKSPEIRKHLEFLKILKLHVWPSLSRARYVSLLKDFVESEFFVIDGDSLILMLLNEEVQY
LTLFYQIECFLQDFTQRGARYIVVFFKDAEQMYFRYPHFLFLRTALIEHLKHNTRTTVHT
EFSNCLSPAWEVFLKKSYPYFIIVSDIGLTSLQTNYLTIFIAHSLSKKITIVLASGQECD
TLRVYGYHLQSMAKHRLFFQKYEKDLRCVCEAIVRYKEPSLYLYGHLKLSLKSVQEEVCR
TIPLLKQLWPEGYDIRRVVCVLACAVGLKIYSDMLTNAHASRGTKTEKSESGRSKPPSPE
AAADLCRMQCLTVVFLLHMPLSQRAQIRVMKSCWTKQVLPIMKMQQLCAHFVLKELSDKN
DWKLDLTYLPDLNDESLLKNLAHYYQIEYTEGLEFQKELGKEMEDEYLSLWDAVTKLTVK
YGFGDAFPIRTTSQVFLDQEQTSPRVYEDKIPAIGLFPVKSDLVKEYAGDILKDLPVLDD
NDPAVSSLTKYKEFDELRHWHSGRPLTEEYERVHCNADAKSKDPYERKQIQKLQTFYRFY
GSTLQEGTSKFVVCQKNAPGSANNPVKKKKMQKSKAEIIAEENNKRLKIKEEMKEQEQWK
TLQISTEKEIKANLTVGINKLEKFLKNLKSKSVKFSVELSGLSACLEVWKEHCKKQDTKS
KDLSKAVQLMRRIHILLEKYQDLLEKSHLQKLTQCLRLLGFENLACSLSGQVREKSDGEN
TSRYAIEVGPVRFQLQYMDYYLLREERNDPDPRVENFIPDTWQRELLDAVDNNESAVIVA
PTSSGKTYASYYCMEKVLKTSDDGVVVYVAPTKALVNQVVGTVYSRFTKTLPDGLVVCGV
FTRDYRNDVMNSQILVTVPQCLEILMLSPRCQKWVKRIQYVIFDEVHCLGGEIGAEVWEH
LLVTIRCPFLALSATISNPEHLTEWLQSVKRYWQRAENMIEENSTNSEKNSTRKLKVKSK
VKEPKKTYRVRLVLYGERYNDLEKYVCSSTGGDFLFEHYHPCAALTVNHIENYGIPADLS
LSPKESVQLYDTMVEVWKEWPRAQELDPEEFVSFKNKVVIKKMDVRKYEQELKKELSKWI
ELGERQKVCELLDRFKPQPVDCSDQEKWMQFACFVEKLHEMDKLPAIIFIFGLDSVERAA
TNVFIHLMEKQKNEQDPKAKREIEDIKDKLRKVDKSLTKCKTNDTKKLKTSKAESIIQLW
TMKNELEKRLKKLSVTPSACTYADPKAVDEDTLRKIFYRLRFERKGYLQQMLARRGIGYH
HGSMSIKQRQAVEMLFRLGYIKVVTATSTLALGINMPCKSVVFADDSVYLDALSYRQMSG
RAGRRGHDMIGNVFFYDIPLPKIERLIKSNVPQLKGQFPLTITLILRLMLLAAKADDKAD
ASAKALSVLKHSLMTFKNERHAEILKIYFMFSLQFLIKEGYLDQEGNPVGFAGLVTHLHY
HEPSNFVLVSFLVKGLFHKLCQPIKGSNDFSDDVLEKLVLILANLFGQKYLPARSMTLRH
KFYQSKVFLEDLPEDFADAVNEYNTKVAENFAHFLLTTAKLADKEQEYRLPLSKTDFTTK
KWHGSELASYLMDNTKRISAISPFACLSGMVDDDLFHAENVNKAVLRSLGINVKNCPMLH
LKKYDNQGRRLPLNAYALDFYKHGSLTALTTDNWLNEGEAYYLLKDFLLVIKSIGVSLSE
LCDDPNDNVLLAFQKLGENYSKKLAAV
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggattctgcagaagataatttcaagaaggttgttcgtgataccacaaatggaagtacg
agtaaggatgatagtgatgatatggatagcgactttatcgacagtgaggaaataggctgc
atttcaacaaagaaaaacaaagagggtgggagtacaagtgaccatgatgagggggatgag
accagtgacaaggcagaagcagctgtggtgcagatgcttaaagaaaaggaagacaaagaa
aaagaagttgaagacccagattatggtaaagcttataatatcctgaccactgaagaagtg
gcacagaaggaatcacaaactgaaggcaaagatttcagagttcttcagaatgagtgggat
tccaaaagccctgaaataagaaagcatcttgaatttctgaagattttgaagctacacgtt
tggccgtccctatcaagagctcggtatgtcagtttgttaaaagacttcgttgagtctgaa
ttctttgtgatagatggggattccttaattcttatgttgttaaatgaggaagtacagtat
ctaaccttattctaccaaattgaatgcttcttgcaagacttcactcaaagaggagcaaga
tatatcgttgttttcttcaaggatgcagagcagatgtattttcgctatcctcattttctt
ttcttacgtactgcattaatagaacacctgaagcacaacacacgcactactgttcataca
gaattttccaattgtttatcaccagcatgggaggttttcctgaagaaaagctatccttat
ttcatcattgtatctgacataggattgacctctctccaaaccaactatttgactattttt
attgctcattcattgtcaaagaaaatcactattgtacttgcttcaggacaggaatgtgat
actcttagagtttatgggtatcatcttcagagtatggcgaaacacaggttattttttcaa
aagtatgaaaaagatctgcgatgtgtctgtgaagccatagtcaggtacaaagaaccatcc
ctgtatctgtatggacatctcaagctaagcctgaaaagtgtacaagaagaggtttgccgg
actatccctctgttgaaacagctgtggcctgaaggatatgacattcggcgcgtagtctgt
gttcttgcttgtgcagtggggttaaaaatatacagtgatatgctgacaaatgcacatgct
tccaggggaacaaagacagagaaatcagaaagcggaagaagtaaaccaccatctccagaa
gcagcagctgacctctgtagaatgcaatgtcttacagtggtttttcttcttcatatgcct
ctttctcagagagctcagattagggttatgaaatcctgctggactaagcaagttttacca
ataatgaaaatgcaacagttgtgtgcgcattttgttctgaaagagctaagtgataaaaat
gattggaaactggatttaacatatcttcctgacctaaatgatgagtcactgctcaaaaat
cttgcacattactatcagattgaatacactgaaggattagaattccaaaaggaactgggg
aaagaaatggaggatgaatatctaagtttatgggatgctgtaaccaaattgactgtgaaa
tatggttttggagatgctttcccaatacgaactacttcccaagtgttccttgatcaggaa
cagacatcacctagagtgtatgaagacaaaattcctgctataggactattcccagtgaaa
tctgatcttgttaaagagtatgctggagatattttgaaagacctacctgttttagatgac
aatgatcctgcagtttcttcacttactaaatacaaggaatttgatgagcttcgtcactgg
cattctggcagaccattgactgaggagtatgaacgtgtacactgcaacgctgatgcaaaa
tccaaagatccatatgaaagaaaacaaattcaaaagttacagactttttatcgtttttat
ggaagcacattgcaagagggcacttcaaagtttgttgtatgccaaaagaatgcaccaggg
agtgctaataatcccgtcaaaaagaaaaaaatgcaaaaaagtaaagcagaaataattgca
gaggaaaacaacaagcgactaaaaattaaagaagaaatgaaagaacaggagcaatggaaa
accttgcagatatcaactgaaaaggaaataaaagcaaatctaactgttggaataaacaaa
ttggagaagtttctcaagaatcttaaaagtaaatctgtgaagttcagcgtagaattgtca
ggactgtctgcctgtttagaagtatggaaggaacactgcaaaaaacaagatactaaatct
aaagatttaagcaaagctgttcaactcatgaggagaattcatatcctccttgaaaaatat
caagacctcttggagaaatcacatctacaaaaactgacccaatgtctacgacttcttgga
tttgagaatttggcatgttcactgtctggccaggttagagaaaaaagtgatggtgagaat
acaagtagatatgctattgaggtgggaccagttcgcttccagctacaatacatggactat
tacttgctcagagaagagagaaatgatccagatccccgagtggaaaatttcataccagac
acgtggcagcgagaacttcttgatgctgttgataacaatgagtctgcagtgatagttgct
cctacttcatcgggaaaaacatatgcatcatattattgcatggagaaagttctgaaaacg
agtgatgatggagtagttgtgtatgttgctcctacaaaggctcttgtaaaccaagtggtg
ggaactgtatacagtcggttcaccaagacgcttccagatggattggtggtgtgcggagtc
ttcacacgagattatcgtaatgatgtcatgaattctcagatattagtgactgtgcctcaa
tgtttagaaatcttgatgctgtctcctcgttgccagaaatgggtcaaacggatacaatat
gttatatttgatgaggtccattgtcttggtggcgaaattggagcagaggtttgggagcat
cttctggtaacaattcggtgtccgtttttggctctctctgctactatcagtaacccagaa
cacctaactgagtggttacaaagtgtgaaaaggtattggcaacgtgctgagaacatgata
gaagaaaactctaccaactctgaaaagaattctacaagaaaacttaaagtgaaatctaaa
gtaaaagaaccaaaaaaaacataccgtgttagactagtcctgtatggagaaagatacaat
gatttggaaaagtatgtgtgttcttcaacgggtggtgattttctctttgaacattatcac
ccatgtgctgcattaacagtcaatcatattgagaactatggtattcctgcagatctttct
ctgtctccaaaagagagtgttcagctgtatgacacaatggtagaagtctggaaggagtgg
ccaagggcacaggagctagatcctgaggagtttgtctctttcaagaataaagtagtaata
aaaaagatggatgtgaggaaatatgaacaggaactgaagaaagagctaagcaaatggatt
gaacttggcgaaagacagaaggtatgtgagcttctggatcgctttaagccccaacctgtg
gattgctcagatcaggaaaaatggatgcaatttgcatgctttgttgaaaaattgcatgag
atggataaattgcctgccataatttttatatttggcttagattcagtggagcgtgcagcc
actaatgtattcattcatttgatggaaaaacaaaaaaatgaacaagaccctaaagccaag
agggaaatagaggacataaaggacaaactaagaaaagtggataaatcactaacgaaatgc
aagacaaatgataccaaaaagttgaaaaccagtaaagcagaaagcataatacagctctgg
actatgaaaaatgagttagagaaaagacttaaaaagcttagtgtgacgccttctgcgtgt
acttacgctgatcctaaagcagtagatgaagatactttgaggaagattttttatcgactt
aggtttgaaagaaagggttatcttcagcaaatgctggcacggaggggcattggatatcat
catggatctatgtccataaagcagagacaagcagtggagatgcttttcagactgggatat
atcaaggtcgtcacagctacttcaacacttgctctaggaatcaacatgccgtgtaaatct
gttgtctttgccgacgattctgtctatttggatgcactgagctacagacagatgtcagga
cgtgctggaagacggggacatgatatgattggaaatgtgttcttctatgatataccactg
cccaaaattgaaagacttatcaaatcaaacgtacctcaactgaaaggccagttccctctg
actattaccttaatactgagactcatgctgttggctgcgaaggctgatgacaaagcagat
gccagtgcaaaggcattgtcagtgttgaagcactcactgatgactttcaaaaatgaaaga
catgctgaaatattaaaaatttattttatgttttccttgcagtttctaatcaaagagggc
tacttggatcaagaaggtaaccccgtaggatttgctggacttgtgactcacttacactat
catgaaccttcaaattttgtcttagtgagttttcttgtgaaaggtttattccacaaattg
tgccagccaattaaaggctcaaatgacttttcagatgatgtcctggaaaagctagtgctt
attctagcaaatctgtttgggcagaagtatcttccggcccgctcaatgacattgagacac
aaattttaccaatccaaggtcttcctagaagatctgccagaagactttgcagatgctgta
aatgagtacaacaccaaagttgcggaaaattttgctcattttcttctgacaactgccaaa
ctggcagataaggaacaagaatacagacttccactgtcaaagacagattttacaactaaa
aaatggcatggctctgaactagcatcttatttgatggacaacaccaaacgcatatctgct
atctcaccctttgcgtgtttatctggaatggttgacgatgatctatttcatgcagagaat
gttaataaagcagtgctacgttcccttggaattaatgttaaaaactgccctatgcttcac
ttgaagaagtatgataatcaaggacgacgcctgccactcaatgcatatgcactggacttt
tataagcatggttccttgactgccttgacaactgataactggttaaacgaaggagaagct
tactacctgctcaaggattttttactcgtcattaagtctataggagtatcactgagtgaa
ctatgtgatgatccaaatgataatgttctactggcatttcaaaaactaggagaaaactac
agtaaaaaactggctgccgtctag
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