Anas acuta (northern pintail): 137856773
Help
Entry
137856773 CDS
T11380
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu04137
Mitophagy - animal
aacu04140
Autophagy - animal
aacu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137856773 (HIF1A)
04137 Mitophagy - animal
137856773 (HIF1A)
04148 Efferocytosis
137856773 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aacu03000
]
137856773 (HIF1A)
Transcription factors [BR:
aacu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
137856773 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DUF4350
Motif
Other DBs
NCBI-GeneID:
137856773
NCBI-ProteinID:
XP_068538581
LinkDB
All DBs
Position
5:6683698..6749627
Genome browser
AA seq
853 aa
AA seq
DB search
MGAKTVTAEGVEQDFKALKATATTAALPPLPPDVPRQKNIGRAGSKATFGDQPRISSERR
KEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIMRLTISYLRMRKLLDAGEL
ETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCMGLTQFELTGHSVFDFTHP
CDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRTVNIKSATWKVLHCTGHI
RVYDTCSNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDER
ITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVE
TQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECMLKPVESPDMKMTKIFNKD
DLDDTNNLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDEQQCDEVPLYNDVMLPSSS
EKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPNTETLELSFTMPQVQEQPTS
PSDASTSQSSPEPSSPNDYCFDVDNDMANEFKLELVEKLFAIDTEAKNPFSTQETDLDLE
MLAPYIPMDDDFQLRSFDQLSPLESSSSSSQNAATITIFQQTQTPSTTADEIKPVAERVD
DVKTLIVPSSPVHIISDTSSAPASPYGGNRSRTASPIRTGKGTLDQTEKPCPGTPSLLTV
TLNKRSTAMDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIGSLFQQTGDRGGNASLAWK
RVKACKTTGHNGVEQKTIILLSTDIASKLLGQSMDESGLPQLTSYDCEVNAPIQGNRNLL
QGEELLRALDQVN
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctaaaactgtaacagcagaaggcgtggaacaagatttcaaggcactcaaagcc
acggcaacaacagcagcactgccaccactgccaccagatgtgcccagacagaagaacatt
gggagagctggcagtaaggccacttttggagaccagccaaggattagttctgaacgcagg
aaagaaaaatcaagagatgcagctcgatgtcgaagaagcaaggagtcggaagtgttctac
gaacttgctcatcagctgcctcttccgcacacggtgagcgcccaccttgacaaggcctcc
atcatgaggttgaccatcagctacttgcgcatgaggaagctgctggatgctggtgagctg
gagacagaagccaaaatggagaaggaactgaactgtttctacctgaaagctcttgatgga
tttgtcatggttctctctgaagatggggacatgatttacatgtctgaaaatgtgaacaag
tgtatgggactcactcagtttgagttgacggggcacagtgtatttgatttcactcatcca
tgtgaccatgaagagctgagagaaatgcttacgcacagaaatggtcctgtgaaaaagggc
aaagaacaaaacacggagcgcagcttttttctcagaatgaagtgcacactgaccagcagg
ggaagaacagtgaatataaagtctgctacgtggaaggtactgcactgcaccgggcacatc
cgcgtgtacgacacgtgcagtaatcaaactcactgtggctacaagaagcctcccatgacg
tgcttggtgttgatatgtgaacctattcctcacccatccaacattgaggtcccactggac
agtaaaacgttcctcagtcgtcacagtctcgatatgaagttttcctattgtgatgaaaga
attacagagctgatgggatatgagccagaggaactcctgggtcgttccatctatgagtac
taccatgcgctggattctgatcatctgaccaaaacgcaccatgatatgttcacaaaaggg
caggtgacaacagggcagtacagaatgcttgctaaacaaggtggctatgtctgggttgaa
actcaagcaactgttatatacaacactaagaattctcagccacagtgcatagtatgtgta
aactatgtgttgagtggaattgttcagaaggacttgatattttcccttggacaaactgag
tgtatgctgaaaccagtggagtctccagatatgaaaatgaccaaaatattcaacaaagat
gacctggatgataccaacaacctttttgaaaaacttaaacaggaaccagatgctttaact
gtgctggctccagctgctggagacacaattatctccctagatttcagcagtaatgagtct
gatgaacaacaatgtgatgaagttcctttgtataacgatgtaatgctcccctcatccagt
gagaaattgcagaatataaatatggcaatgtccccactacctgcctctgaaactacaaag
ccacttcgtagcaatgctgatcctgcactcaatagagaagttgtatcaaagctggagcca
aacacagagacactcgaactttcttttaccatgcctcaggtgcaagagcagccaaccagc
ccttctgatgcaagtacaagccaaagttcacctgagcccagtagtcccaatgactattgc
tttgatgtggataatgatatggctaatgagttcaaactggaattagtggagaaactcttt
gcgatagatacagaagcaaaaaatccattctctactcaggaaactgatttagacttggag
atgttggctccttacatcccgatggatgatgacttccagctacgctcctttgatcagcta
tctccactggaaagcagttcttccagctcccaaaacgcagccactattaccatatttcag
cagactcagacaccatcaactactgctgatgaaataaaaccagtggcagaacgtgtggat
gatgtgaagacgctaattgttccttcatctcctgtccacataatcagtgacacgagtagt
gccccagcgtcaccttacggtgggaacaggagtcgaactgcatctccaatcagaacagga
aaaggaacattggatcagacagaaaaaccttgtccaggaacacccagtttgctaacagtc
actctgaataaaagatctactgcaatggatgaagaactaaatccaaagatgctagctttg
cataatgctcagagaaaacgaaaaatggaacatgatggttcactttttcaggcagttgga
attgggtctttattccagcagacaggtgaccgtggaggaaatgcatcgcttgcttggaaa
cgtgtaaaggcatgcaaaacaactggtcataatggagtggagcaaaagacaatcattcta
ttatcaactgacatagcaagtaaacttctagggcagtcgatggatgaaagtggactaccc
caactcacaagttatgattgtgaagtaaatgctcccatacaaggcaacagaaacctgcta
cagggggaagaactgctcagagctctggatcaagttaactga
DBGET
integrated database retrieval system
