Anas acuta (northern pintail): 137857420
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Entry
137857420 CDS
T11380
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu04140
Autophagy - animal
aacu04148
Efferocytosis
aacu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137857420 (VPS18)
04148 Efferocytosis
137857420 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
137857420 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aacu04131
]
137857420 (VPS18)
Membrane trafficking [BR:
aacu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
137857420 (VPS18)
Hops complex
137857420 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
zf-RING_16
zf-RING_5
zf-RING_11
zf-RING_UBOX
Lact-deh-memb
zf-ANAPC11
zf-RING_2
zf_RING_Vps8
Nup54_57_C
LETM1_C
STX17_N
DUF5600
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
137857420
NCBI-ProteinID:
XP_068539950
LinkDB
All DBs
Position
5:32949981..32960113
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AA seq
974 aa
AA seq
DB search
MASILDEYEDSLHRSAAVQQSRAAVGIPHSGYVNARLEKETPIFNKQRIDFAPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEARVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKARTLSRWKGHLIESVGWNKFLGTETNTGPILVGTAQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGIEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFALHADHLPSFREFPASFGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGNLDYS
RPDSILSDERVWVYPSDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNEQVVFQDLFL
EKFGTLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSSL
KPSEKTQTTLLTTWLTELYLNWLGILEGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHHACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAATSQPSKGHHRPKDADTASLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggacgagtacgaggactccctgcaccgctccgccgccgtgcagcag
agccgcgccgctgtgggcatcccgcactccgggtatgtgaatgcacggctggagaaggaa
acaccaatatttaacaagcaaagaattgattttgctcctccagagaaaattaacagctta
gtggtctcctctaaccagctctgtatgagccttggcaaagacacccttctcaggattgat
cttgggaagccagatgaacctaatcaggtagagttgggacgcaaagatgaagccagagtc
tacaagatgtttttggaccacacaggctctcatctgctgattgctctgaacaccagtgaa
tgcctttaccttaacagaagtgttcagaaagcacggacactctcccgctggaaaggccac
ttaattgaaagtgtgggctggaacaaatttcttggtacagagaccaacactgggcctatc
ctggtgggaacagcccaggggcaaatctatgaagccgaaatatctgtcagtgagggaagc
ctcttcagcactaatcccgaccagtacttccgacaggtctacactctggaggaggaatca
ggacccgcaccagtctgctgtttagagattgaacgaggaatagaaggaaaattttttatt
atcgccaccactcgaaagagactattccagtttgttggcaaagtgcctgaagggacagag
cagcaaggcttcagctccatatttgctctgcatgctgatcatttgcccagcttccgggag
tttccagccagcttcggtttcagcgagatagccttttacactccaaaactgcgttccaac
ccacgctcctttgcctggatgatgggtaacggtgttttgtatggtaatttggattatagc
cgtcctgattcaattctgagtgatgaacgggtctgggtttatccttctgatattgacata
actgtgaacaagccaatatccattgtacttacccagtttcactttctgttgctgctgcct
gaccgggtaaaggctgtatgcactctgaatgagcaggttgtctttcaagacctgttcctg
gagaagtttggcacattgacacgcatgatcaaggatcccacagttcagcagatatggatc
cacacagagaaagtagtgttccgctatcacgtccagcgggaatctagagatgtgtggaag
atgtatatgaatatgaacaaatttgatttagctaaagagtattgtaaagaccgtccagag
tgcctagacattgtgttggcaaaagaggcagagcactgcttccaaaacaagagataccta
gacagtgccaaatgttatgcgctgacccagaactacttcgaggaaattgcccttaagttc
attgaagccaagcaagaagaggccctgatggagtttctgattaagaagctaagtagcctg
aagccttctgagaagacacagaccactctactgaccacgtggttaacagagctgtatctg
aactggctaggtatattggaaggagatccctcacagcgaaatctctatttggatacacgg
gagaaatttcgcaccttcctgagcagccctaaaaacaaagactgtctgtttaataatcgg
gcatctatttatgaactgttggcgagccatggggacacggagcacatggtctactttgca
gtcatcatgcaggactatgagcgagtagtagctcaccactgccagcatgatgagtatgat
gaagctttaaatgtgctgtctaggcacagagatgaaaagctgttctacaagttctcccca
gtcctcatccagcatattcccaaaaaggtagttgatgcttggatttctatgggctccaga
cttgatgccaggaatctcattccagctcttgttaactatagccagagtgccagcacccag
cagatcaatgaagccattagatacatggagttctgtgtctatcagctggaggaaacccag
caagctattcacaactacttgttgtctctctacgctttgtgtcggccagactcgctgcta
tcatacctggagcaagcaggaaccaatccaaacaggatccactacgacctgaagtacgca
ctgcgcttgtgtgcagagcatgggcaccaccatgcttgtgtccatatttacaaagtgatg
gaattatatgaagaagccgtggatcttgcgttacaggtggatgttgatcttgccaagtcc
tgtgcagacctccctgaagatgatgaggaactccggaagaagctctggttgaagattgct
cgccatgttgttcaagaagagaaagatgtcaagaaggcaatggcttgcctttccagctgc
gccctgctgaagattgaagacgtcctgccattctttccagactttgtcactattgaccat
tttaaggaggcaatctgtaactctctggaggactacaacaagcacattgaggagctgaaa
agggagatggaagaagccacacagagtgccaagagaattcgagaggacatccaggaaatg
agaaataagtatggctccgttgagcctcaggaaaagtgtgctgcttgtgactttccactt
ttaaaccgcccattttaccttttcctttgtggtcacatgttccattatgactgtcttctt
caggcagtttttccaaaccttcctgcctataagcaggcaaagcttgaagatcttcaaaag
aagctggcagctaccagtcagccttccaaaggccaccatcgtcccaaggatgcagatacc
gctagcctggggaaggggcagcagagccgggaacaaatcaaagctgacattgatgatatt
gtggcagccgaatgtgtgtactgtggagaactgatgatccggtccattgacaagcccttt
attgatccccaaaagtacgaagaggagatgcaaagctggctgtag
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